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-rw-r--r--shepherd/init.d/bnw.scm12
-rw-r--r--shepherd/init.d/gitea.scm12
-rw-r--r--shepherd/init.d/ipfs.scm12
-rw-r--r--shepherd/init.d/mcron.scm12
-rw-r--r--shepherd/init.d/power.scm13
-rw-r--r--shepherd/init.d/rn6app.scm13
-rw-r--r--shepherd/init.d/test-upgrade.scm15
-rw-r--r--shepherd/init.scm107
8 files changed, 98 insertions, 98 deletions
diff --git a/shepherd/init.d/bnw.scm b/shepherd/init.d/bnw.scm
new file mode 100644
index 0000000..ed9bf9d
--- /dev/null
+++ b/shepherd/init.d/bnw.scm
@@ -0,0 +1,12 @@
+(define bnw
+ (make <service>
+ #:provides '(bnw)
+ #:docstring "Run the Beyesian Network Webserver"
+ #:start (make-forkexec-constructor
+ '("/usr/bin/sudo" "/home/shepherd/run_bnw.sh")
+ #:log-file "/home/shepherd/logs/bnw.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services bnw)
+
+(start bnw)
diff --git a/shepherd/init.d/gitea.scm b/shepherd/init.d/gitea.scm
new file mode 100644
index 0000000..b5d77f0
--- /dev/null
+++ b/shepherd/init.d/gitea.scm
@@ -0,0 +1,12 @@
+(define gitea
+ (make <service>
+ #:provides '(gitea)
+ #:docstring "Run a Gitea instance"
+ #:start (make-forkexec-constructor
+ '("/usr/bin/sudo" "/home/shepherd/run_gitea.sh")
+ #:log-file "/home/shepherd/logs/gitea.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services gitea)
+
+(start gitea)
diff --git a/shepherd/init.d/ipfs.scm b/shepherd/init.d/ipfs.scm
new file mode 100644
index 0000000..1b8d21a
--- /dev/null
+++ b/shepherd/init.d/ipfs.scm
@@ -0,0 +1,12 @@
+(define ipfs
+ (make <service>
+ #:provides '(ipfs)
+ #:docstring "Run the IPFS daemon"
+ #:start (make-forkexec-constructor
+ '("/usr/bin/sudo" "/home/shepherd/run_ipfs.sh")
+ #:log-file "/home/shepherd/logs/ipfs.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services ipfs)
+
+(start ipfs)
diff --git a/shepherd/init.d/mcron.scm b/shepherd/init.d/mcron.scm
new file mode 100644
index 0000000..415e1f0
--- /dev/null
+++ b/shepherd/init.d/mcron.scm
@@ -0,0 +1,12 @@
+(define mcron
+ (make <service>
+ #:provides '(mcron)
+ #:docstring "Run the mcron daemon"
+ #:start (make-forkexec-constructor
+ '("/var/guix/profiles/per-user/shepherd/guix-profile/bin/mcron")
+ #:log-file "/home/shepherd/logs/mcron.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services mcron)
+
+(start mcron)
diff --git a/shepherd/init.d/power.scm b/shepherd/init.d/power.scm
new file mode 100644
index 0000000..d35230c
--- /dev/null
+++ b/shepherd/init.d/power.scm
@@ -0,0 +1,13 @@
+(define power
+ (make <service>
+ #:provides '(power)
+ #:docstring "Run the BXD Power Calculator app"
+ #:start (make-forkexec-constructor
+ ;(system* "/var/guix/profiles/per-user/shepherd/current-guix/bin/guix" "environment" "--ad-hoc" "rn6-assembly-error-app" "--" "/bin/sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'")
+ '("/home/shepherd/run_power.sh")
+ #:log-file "/home/shepherd/logs/power.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services power)
+
+(start power)
diff --git a/shepherd/init.d/rn6app.scm b/shepherd/init.d/rn6app.scm
new file mode 100644
index 0000000..6ae89c6
--- /dev/null
+++ b/shepherd/init.d/rn6app.scm
@@ -0,0 +1,13 @@
+(define rn6app
+ (make <service>
+ #:provides '(rn6app)
+ #:docstring "Run RN6 Assembly Error app"
+ #:start (make-forkexec-constructor
+ ;(system* "/var/guix/profiles/per-user/shepherd/current-guix/bin/guix" "environment" "--ad-hoc" "rn6-assembly-error-app" "--" "/bin/sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'")
+ '("/home/shepherd/run_rn6app.sh")
+ #:log-file "/home/shepherd/logs/rn6app.log")
+ #:stop (make-kill-destructor)
+ #:respawn? #t))
+(register-services rn6app)
+
+(start rn6app)
diff --git a/shepherd/init.d/test-upgrade.scm b/shepherd/init.d/test-upgrade.scm
new file mode 100644
index 0000000..0c17303
--- /dev/null
+++ b/shepherd/init.d/test-upgrade.scm
@@ -0,0 +1,15 @@
+(define test-upgrade
+ (make <service>
+ #:provides '(test-upgrade)
+ #:docstring "Build all the services to make sure they work on an upgrade"
+ #:start (make-forkexec-constructor
+ ;; First attempt to build all the packages and only afterward attempt to build the containers.
+ (when (zero? (system* "guix" "build" "-L" "/home/shepherd/guix-bioinformatics"
+ "--no-grafts" "bnw" "gitea" "go-ipfs" "edirect-gn"
+ "bxd-power-calculator-app" "rn6-assembly-error-app"))
+ (zero? (system* "guix" "system" "-L" "/home/shepherd/guix-bioinformatics"
+ "container" "/home/shepherd/guix-bioinformatics/gn/services/bnw-container.scm"
+ "--share=/home/shepherd/logs/bnw-server=/var/log" "--network")))
+ #:log-file "/home/shepherd/logs/test-upgrade.log")
+ #:one-shot? #t))
+(register-services test-upgrade)
diff --git a/shepherd/init.scm b/shepherd/init.scm
index 232af4a..b458e59 100644
--- a/shepherd/init.scm
+++ b/shepherd/init.scm
@@ -1,102 +1,13 @@
-(use-modules (shepherd service))
+(use-modules (shepherd service)
+ ((ice-9 ftw) #:select (scandir)))
-(define date+%s
- (strftime "%s" (gmtime (current-time))))
-
-(define bnw
- (make <service>
- #:provides '(bnw)
- #:docstring "Run the Beyesian Network Webserver"
- #:start (make-forkexec-constructor
- '("/usr/bin/sudo" "/home/shepherd/run_bnw.sh")
- #:log-file (string-append "/home/shepherd/logs/bnw-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services bnw)
-
-(define gitea
- (make <service>
- #:provides '(gitea)
- #:docstring "Run a Gitea instance"
- #:start (make-forkexec-constructor
- '("/usr/bin/sudo" "/home/shepherd/run_gitea.sh")
- #:log-file (string-append "/home/shepherd/logs/gitea-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services gitea)
-
-(define ipfs
- (make <service>
- #:provides '(ipfs)
- #:docstring "Run the IPFS daemon"
- #:start (make-forkexec-constructor
- '("/usr/bin/sudo" "/home/shepherd/run_ipfs.sh")
- #:log-file (string-append "/home/shepherd/logs/ipfs-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services ipfs)
-
-(define mcron
- (make <service>
- #:provides '(mcron)
- #:docstring "Run the mcron daemon"
- #:start (make-forkexec-constructor
- '("/var/guix/profiles/per-user/shepherd/guix-profile/bin/mcron")
- #:log-file (string-append "/home/shepherd/logs/mcron-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services mcron)
-
-(define power
- (make <service>
- #:provides '(power)
- #:docstring "Run the BXD Power Calculator app"
- #:start (make-forkexec-constructor
- ;'(system* "/var/guix/profiles/per-user/shepherd/current-guix/bin/guix" "environment" "--ad-hoc" "rn6-assembly-error-app" "--" "/bin/sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'")
- '("/home/shepherd/run_power.sh")
- #:log-file (string-append "/home/shepherd/logs/power-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services power)
-
-(define rn6app
- (make <service>
- #:provides '(rn6app)
- #:docstring "Run RN6 Assembly Error app"
- #:start (make-forkexec-constructor
- ;'(system* "/var/guix/profiles/per-user/shepherd/current-guix/bin/guix" "environment" "--ad-hoc" "rn6-assembly-error-app" "--" "/bin/sh -c 'R_LIBS_USER=$GUIX_ENVIRONMENT/site-library/ rn6-assembly-error-app'")
- '("/home/shepherd/run_rn6app.sh")
- #:log-file (string-append "/home/shepherd/logs/rn6app-"
- date+%s ".log"))
- #:stop (make-kill-destructor)
- #:respawn? #t))
-(register-services rn6app)
-
-(define test-upgrade
- (make <service>
- #:provides '(test-upgrade)
- #:docstring "Build all the services to make sure they work on an upgrade"
- #:start (make-forkexec-constructor
- (when (zero? (system* "guix" "build" "-L" "/home/shepherd/guix-bioinformatics"
- "--no-grafts" "bnw" "gitea" "go-ipfs" "edirect-gn"
- "bxd-power-calculator-app" "rn6-assembly-error-app"))
- (zero? (system* "guix" "system" "-L" "/home/shepherd/guix-bioinformatics"
- "container" "/home/shepherd/guix-bioinformatics/gn/services/bnw-container.scm"
- "--share=/home/shepherd/logs/bnw-server=/var/log" "--network")))
- #:log-file (string-append "/home/shepherd/logs/test-upgrade-"
- date+%s ".log"))
- #:one-shot? #t))
-(register-services test-upgrade)
+;; Load all the files in the directory 'init.d' with a suffix '.scm'.
+(for-each
+ (lambda (file)
+ (load (string-append "init.d/" file)))
+ (scandir (string-append (dirname (current-filename)) "/init.d")
+ (lambda (file)
+ (string-suffix? ".scm" file))))
;; Send shepherd into the background
(action 'shepherd 'daemonize)
-
-;; Services to start when shepherd starts:
-;; Add the name of each service that should be started to the list
-;; below passed to 'for-each'.
-(for-each start '(bnw gitea ipfs mcron power rn6app))