aboutsummaryrefslogtreecommitdiff
path: root/update_archive-pubmed.sh
diff options
context:
space:
mode:
authorEfraim Flashner2021-11-03 14:12:56 +0000
committerShepherd2021-11-03 14:12:56 +0000
commite84380c51846b622f811a6e37749759b991fc203 (patch)
treec0c68b4460c29d1e1365bdc4407b7113b31877a9 /update_archive-pubmed.sh
parent864cc32f0195a1342094494f87018eb3414a4d97 (diff)
downloadgn-shepherd-services-e84380c51846b622f811a6e37749759b991fc203.tar.gz
genecup: pubmed updater uses genecup guix profile
Diffstat (limited to 'update_archive-pubmed.sh')
-rwxr-xr-xupdate_archive-pubmed.sh2
1 files changed, 1 insertions, 1 deletions
diff --git a/update_archive-pubmed.sh b/update_archive-pubmed.sh
index e432586..2e9d129 100755
--- a/update_archive-pubmed.sh
+++ b/update_archive-pubmed.sh
@@ -1,2 +1,2 @@
#!/bin/sh
-/bin/su -l hchen -c 'export EDIRECT_PUBMED_MASTER=/export2/PubMed; export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt; export NLTK_DATA=/export2/PubMed/nltk_data; unset PATH; $(/var/guix/profiles/per-user/shepherd/current-guix/bin/guix build edirect)/bin/archive-pubmed'
+/bin/su -l hchen -c 'export EDIRECT_PUBMED_MASTER=/export2/PubMed; export PERL_LWP_SSL_CA_FILE=/etc/ssl/certs/ca-certificates.crt; export NLTK_DATA=/export2/PubMed/nltk_data; unset PATH; $(/var/guix/profiles/per-user/genecup/current-guix/bin/guix build edirect)/bin/archive-pubmed'