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Guix configuration for genenetwork machines
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30 hours
DO NOT MERGE: Revert commit 4ddf33d
production-container
Frederick Muriuki Muriithi
2 days
Run script to make non-human data public
Frederick Muriuki Muriithi
2 days
Pass log-level to gn-auth application
Frederick Muriuki Muriithi
2 days
Define REQUESTS_CA_BUNDLE envvar for python-requests
Frederick Muriuki Muriithi
11 days
Do not share auth-db with genenetwork3 gunicorn app.
Frederick Muriuki Muriithi
11 days
Add llm-db-path field to genenetwork configuration..
Frederick Muriuki Muriithi
11 days
Remove obsolete SSL key configuration.
Frederick Muriuki Muriithi
11 days
Enable AI search in genenetwork service.
Frederick Muriuki Muriithi
2024-10-24
Add GN3 alias server to genenetwork service.
Frederick Muriuki Muriithi
2024-10-24
Add sanitizer for log-level configuration field.
Arun Isaac
2024-10-24
Make <gn-uploader-configuration> log-level a symbol.
Arun Isaac
2024-10-24
Re-format and improve indentation.
Arun Isaac
2024-10-24
Regularize <gn-uploader-configuration> getter functions.
Arun Isaac
2024-10-24
Add log-level field to genenetwork-configuration.
Frederick Muriuki Muriithi
2024-10-24
Set REAPER_COMMAND in gn3.conf.
Frederick Muriuki Muriithi
2024-10-24
Set GENOTYPE_FILES in gn3.conf.
Frederick Muriuki Muriithi
2024-10-02
Update server root for gn-uploader.
Frederick Muriuki Muriithi
2024-08-13
Forward the scheme to the client to generate correct URIs.
Frederick Muriuki Muriithi
2024-08-13
gn-uploader: Configure link to GN2 server.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Add `AUTH_SERVER_URL` to the configurations.
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update ENVVAR name
Frederick Muriuki Muriithi
2024-08-07
gn-uploader: Update configuration variable name.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: use `gn-uploader-configuration` as default.
Frederick Muriuki Muriithi
2024-07-22
gn-uploader: make app user owner of upload directory tree
Frederick Muriuki Muriithi
2024-07-12
Extend the genenetwork-service-type with the mcron indexer service
Frederick Muriuki Muriithi
2024-07-12
Generalise index-genenetwork cron gexp
Frederick Muriuki Muriithi
2024-06-28
Make secrets dirs writable by relevant services.
Frederick Muriuki Muriithi
2024-06-28
Remove duplicated, and wrong settings.
Frederick Muriuki Muriithi
2024-06-28
Fix permissions: Only files are read-only
Frederick Muriuki Muriithi
2024-06-28
Make relevant services available to each service.
Frederick Muriuki Muriithi
2024-06-28
Set secrets as directories for services with multiple secrets.
Frederick Muriuki Muriithi
2024-06-28
Add JWT SSL keys configurations.
Frederick Muriuki Muriithi
2024-06-12
gn-uploader: Setup profile path
Frederick Muriuki Muriithi
2024-05-07
gn-uploader: Serve static files via nginx.
Frederick Muriuki Muriithi
2024-04-12
gn-uploader: use installed entry-point.
Frederick Muriuki Muriithi
2024-04-12
gn-uploader: use defined app in wsgi.py to pick up logging configs.
Frederick Muriuki Muriithi
2024-04-12
Set up log level in gunicorn
add-gunicorn-logging
Frederick Muriuki Muriithi
2024-04-10
gn-uploader: Enable changing of log-level for container.
Frederick Muriuki Muriithi
2024-04-09
gn-uploader: Change ownership of data-directory
Frederick Muriuki Muriithi
2024-04-09
gn-uploader: Made datadir writable and set up uploads directory.
Frederick Muriuki Muriithi
2024-04-05
Document configuration settings
Pjotr Prins
2024-04-03
Set up SQL_URI for gn-auth.
Frederick Muriuki Muriithi
2024-04-03
gendev: special machine for Pjotr
Pjotr Prins
2024-04-01
Share TMPDIR between GN2 and GN3
Pjotr Prins
2024-04-01
fallback: have gn2 and gn3 share a source directory so we can update/debug so...
Pjotr Prins
2024-03-28
gn-uploader: Increment maximum size of uploadable files.
Frederick Muriuki Muriithi
2024-03-25
Add gn-uploader service.
Frederick Muriuki Muriithi
2024-03-21
Add timeout for proxies
Pjotr Prins
2024-03-05
Let the gunicorn-gn-auth user own the auth database.
Arun Isaac
2024-03-05
Pass on the request scheme to GN2 app
Frederick Muriuki Muriithi
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