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add-gunicorn-logging
change-working-dirs-to-tmp
disable-tests
gn-local-development-container
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gn-uploader-nginx-static-files
main
pass-virtuoso-ttl-dir-to-xapian-indexer
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Guix configuration for genenetwork machines
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2025-07-10
gn-local-development-container: Properly set "REQUESTS_CA_BUNDLE".
gn-local-development-container
Munyoki Kilyungi
2025-05-12
Fix shell var syntax in init_xapian for dir move
Munyoki Kilyungi
2025-05-12
Remove un-necessary copy.
Munyoki Kilyungi
2025-05-12
Remove setting python path.
Munyoki Kilyungi
2025-05-12
Fix command.
Munyoki Kilyungi
2025-05-12
Remove hanging "continue".
Munyoki Kilyungi
2025-05-12
Update auth db.
Munyoki Kilyungi
2025-05-10
Use correct secret key.
Munyoki Kilyungi
2025-05-10
Add extra log info when generating and loading ttl files.
Munyoki Kilyungi
2025-05-10
Delete ttl files if they exist.
Munyoki Kilyungi
2025-05-10
Correctly set the sql-uri.
Munyoki Kilyungi
2025-05-10
Remove unnecessary copy.
Munyoki Kilyungi
2025-05-10
Skip if file already exists.
Munyoki Kilyungi
2025-05-10
Improve copy.
Munyoki Kilyungi
2025-05-10
Add fallback for container.
Munyoki Kilyungi
2025-05-10
Proper indentation.
Munyoki Kilyungi
2025-05-09
Add cli tutorial for genenetwork set-up.
Munyoki Kilyungi
2025-05-09
Check for guix.
Munyoki Kilyungi
2025-05-09
Add gn-uploader to development container.
Munyoki Kilyungi
2025-05-09
Add gn-uploader-secrets.py
Munyoki Kilyungi
2025-05-09
Add empty gn-uploader sqlite db.
Munyoki Kilyungi
2025-05-09
Modify auth.db to add gn-uploader as a client.
Munyoki Kilyungi
2025-05-08
Remove nss-certs from container.
Munyoki Kilyungi
2025-05-08
Mount /var/lib/data.
Munyoki Kilyungi
2025-05-08
Uso correct passwoord for virtuoso.
Munyoki Kilyungi
2025-05-08
Change the dirs-allowed.
Munyoki Kilyungi
2025-05-08
Add "--init-xapian".
Munyoki Kilyungi
2025-05-08
Add "--init-rdf" option.
Munyoki Kilyungi
2025-05-07
Add local container connection settings for virtuoso.
Munyoki Kilyungi
2025-05-07
Use "db_webqtl_local" for the database.
Munyoki Kilyungi
2025-05-07
Verify that the profile has the guix-bioinformatic channel.
Munyoki Kilyungi
2025-05-06
Add "--init-sql".
Munyoki Kilyungi
2025-05-06
Verify that the profile has the guix-bioinformatic channel.
Munyoki Kilyungi
2025-05-06
Use "db_webqtl_local" for the database.
Munyoki Kilyungi
2025-05-06
Make sure that user has the latest guix-channel set up.
Munyoki Kilyungi
2025-05-06
Add "--init-container" option.
Munyoki Kilyungi
2025-05-06
Remove un-used gn-auth configuration variables.
Munyoki Kilyungi
2025-05-06
Explicitly write to gn{2,3,-auth}.conf files.
Munyoki Kilyungi
2025-05-01
Revert "Add FAHAMU_AUTH_TOKEN."
Munyoki Kilyungi
2025-05-01
Add FAHAMU_AUTH_TOKEN.
Munyoki Kilyungi
2025-05-01
Show the credentials for local development work.
Munyoki Kilyungi
2025-05-01
Add nss-certs to the container.
Munyoki Kilyungi
2025-05-01
Use a proper list.
Munyoki Kilyungi
2025-05-01
Make the flask_session directory readable and writable by gn.
Munyoki Kilyungi
2025-05-01
Create the json folder under genotypes.
Munyoki Kilyungi
2025-05-01
Use the correct genotype file.
Munyoki Kilyungi
2025-05-01
Add missing llm db file.
Munyoki Kilyungi
2025-05-01
Create FLASK_SESSION directory if it doesn't exist.
Munyoki Kilyungi
2025-05-01
Add FAHAMU_AUTH_TOKEN.
Munyoki Kilyungi
2025-05-01
Copy gn-auth secrets to the correct path.
Munyoki Kilyungi
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