diff options
Diffstat (limited to 'genenetwork-development.scm')
| -rw-r--r-- | genenetwork-development.scm | 38 |
1 files changed, 36 insertions, 2 deletions
diff --git a/genenetwork-development.scm b/genenetwork-development.scm index 70b6044..7b01ce3 100644 --- a/genenetwork-development.scm +++ b/genenetwork-development.scm @@ -34,7 +34,7 @@ ((gnu packages databases) #:select (virtuoso-ose)) ((gnu packages gnupg) #:select (guile-gcrypt)) ((gnu packages graphviz) #:select (graphviz)) - ((gnu packages guile) #:select (guile-3.0 guile-zlib)) + ((gnu packages guile) #:select (guile-3.0 guile-git guile-zlib)) ((gnu packages guile-xyz) #:select (guile-dbd-mysql guile-dbi guile-hashing guile-lib guile-libyaml)) ((gnu packages guile-xyz) #:select (guile-sparql) #:prefix guix:) ((gnu packages haskell-apps) #:select (shellcheck)) @@ -43,7 +43,8 @@ ((gnu packages rdf) #:select (raptor2)) ((gnu packages tls) #:select (openssl)) ((gnu packages version-control) #:select (git-minimal)) - ((gnu packages web) #:select (tissue)) + ((gnu packages version-control) #:select (libgit2-1.3) #:prefix guix:) + ((gnu packages web) #:select (tissue) #:prefix guix:) (gnu services ci) (gnu services databases) (gnu services mcron) @@ -60,6 +61,7 @@ (guix profiles) (guix records) (guix store) + (guix utils) (forge forge) (forge laminar) (forge socket) @@ -686,6 +688,37 @@ described by CONFIG, a <genenetwork-configuration> object." ;;; gn-gemtext-threads ;;; +;; Use a patched libgit2 for tissue until there is a way to disable +;; repository ownership validation using the API. See +;; https://issues.guix.gnu.org/55399 +(define libgit2-1.3 + (package + (inherit guix:libgit2-1.3) + (name "libgit2") + (arguments + (substitute-keyword-arguments (package-arguments guix:libgit2-1.3) + ((#:phases phases #~%standard-phases) + #~(modify-phases #$phases + (add-after 'unpack 'disable-ownership-validation + (lambda _ + (substitute* "src/repository.c" + (("git_repository__validate_ownership = true") + "git_repository__validate_ownership = false")))))))))) + +(define guile-git-for-tissue + (package + (inherit guile-git) + (inputs + (modify-inputs (package-inputs guile-git) + (replace "libgit2" libgit2-1.3))))) + +(define tissue + (package + (inherit guix:tissue) + (inputs + (modify-inputs (package-inputs guix:tissue) + (replace "guile-git" guile-git-for-tissue))))) + (define gn-gemtext-threads-project (forge-project (name "gn-gemtext-threads") @@ -970,6 +1003,7 @@ reverse proxy tissue." #:directories? #t)))))) (service tissue-service-type (tissue-configuration + (package tissue) (hosts (list (tissue-host (name "issues.genenetwork.org") |