diff options
Diffstat (limited to 'genenetwork-development.scm')
| -rw-r--r-- | genenetwork-development.scm | 4 |
1 files changed, 2 insertions, 2 deletions
diff --git a/genenetwork-development.scm b/genenetwork-development.scm index dd063d7..843c02b 100644 --- a/genenetwork-development.scm +++ b/genenetwork-development.scm @@ -241,7 +241,7 @@ executed." (setenv "GN3_LOCAL_URL" (string-append "http://localhost:" (number->string #$gn3-port))) (setenv "GENENETWORK_FILES" #$genotype-files) (setenv "HOME" "/tmp") - (setenv "SQL_URI" "mysql://webqtlout:webqtlout@localhost/db_webqtl?unix_socket=/run/mysqld/mysqld.sock") + (setenv "SQL_URI" "mysql://webqtlout:webqtlout@localhost/db_webqtl?unix_socket=/run/mysqld/mysqld.sock&charset=utf8") (chdir "genenetwork2") ;; XXXX: FIXME: R/Qtl tests fail because files are generated in ;; the "/tmp" directory. Currently, "/tmp" is mapped by gn2/gn3 @@ -277,7 +277,7 @@ genenetwork3 source from the latest commit of @var{project}." (setenv "PYTHONPATH" (getcwd)) (invoke "./scripts/index-genenetwork" "create-xapian-index" xapian-build-directory - "mysql://webqtlout:webqtlout@localhost/db_webqtl?unix_socket=/run/mysqld/mysqld.sock" + "mysql://webqtlout:webqtlout@localhost/db_webqtl?unix_socket=/run/mysqld/mysqld.sock&charset=utf8" "http://localhost:9082/sparql") ;; Stop genenetwork3, replace old xapian index and ;; start genenetwork3. |