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| author | Arun Isaac | 2022-09-26 13:21:25 +0530 |
|---|---|---|
| committer | Arun Isaac | 2022-09-26 13:37:41 +0530 |
| commit | bbdd74d2def319f53e40aab3a5e1dc50e5cc2388 (patch) | |
| tree | 17de183da768c759493b0c66ac8bcd70f62eb3a4 /genenetwork-development-deploy.sh | |
| parent | 3b7ac978875648171b485bed992b8976dc3d5e3e (diff) | |
| download | gn-machines-bbdd74d2def319f53e40aab3a5e1dc50e5cc2388.tar.gz | |
Set up xapian search index for genenetwork2 CD.
* genenetwork-development.scm (%xapian-db-path): New variable.
(genenetwork2-shepherd-service)[start]: Share %xapian-db-path with the
container.
(%default-genenetwork2-configuration)[runner]: Pass %xapian-db-path to
CD runner.
* genenetwork/development-helper.scm (genenetwork2-runner-gexp):
Accept xapian-db-path argument and set XAPIAN_DB_PATH environment
variable.
* genenetwork-development-deploy.sh: Expose
/export/data/genenetwork/xapian in the container.
Diffstat (limited to 'genenetwork-development-deploy.sh')
| -rwxr-xr-x | genenetwork-development-deploy.sh | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/genenetwork-development-deploy.sh b/genenetwork-development-deploy.sh index ad9f795..4391bb8 100755 --- a/genenetwork-development-deploy.sh +++ b/genenetwork-development-deploy.sh @@ -30,6 +30,7 @@ container_script=$(guix system container --network \ --share=/var/guix-containers/genenetwork-development/var/lib/virtuoso=/var/lib/virtuoso \ --share=/var/guix-containers/genenetwork-development/var/log/cd=/var/log/cd \ --expose=/export/data/genenetwork/genotype_files \ + --expose=/export/data/genenetwork/xapian \ --share=/export/genenetwork-database-dump \ --share=/var/run/mysqld/mysqld.sock=/run/mysqld/mysqld.sock \ genenetwork-development.scm) |