From bbdd74d2def319f53e40aab3a5e1dc50e5cc2388 Mon Sep 17 00:00:00 2001
From: Arun Isaac
Date: Mon, 26 Sep 2022 13:21:25 +0530
Subject: Set up xapian search index for genenetwork2 CD.

* genenetwork-development.scm (%xapian-db-path): New variable.
(genenetwork2-shepherd-service)[start]: Share %xapian-db-path with the
container.
(%default-genenetwork2-configuration)[runner]: Pass %xapian-db-path to
CD runner.
* genenetwork/development-helper.scm (genenetwork2-runner-gexp):
Accept xapian-db-path argument and set XAPIAN_DB_PATH environment
variable.
* genenetwork-development-deploy.sh: Expose
/export/data/genenetwork/xapian in the container.
---
 genenetwork-development-deploy.sh | 1 +
 1 file changed, 1 insertion(+)

(limited to 'genenetwork-development-deploy.sh')

diff --git a/genenetwork-development-deploy.sh b/genenetwork-development-deploy.sh
index ad9f795..4391bb8 100755
--- a/genenetwork-development-deploy.sh
+++ b/genenetwork-development-deploy.sh
@@ -30,6 +30,7 @@ container_script=$(guix system container --network \
                         --share=/var/guix-containers/genenetwork-development/var/lib/virtuoso=/var/lib/virtuoso \
                         --share=/var/guix-containers/genenetwork-development/var/log/cd=/var/log/cd \
                         --expose=/export/data/genenetwork/genotype_files \
+                        --expose=/export/data/genenetwork/xapian \
                         --share=/export/genenetwork-database-dump \
                         --share=/var/run/mysqld/mysqld.sock=/run/mysqld/mysqld.sock \
                         genenetwork-development.scm)
-- 
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