Remove ccwl from development container.

1 files changed, 1 insertions, 23 deletions

diff --git a/genenetwork-development.scm b/genenetwork-development.scm
index e43cbb3..3df8229 100644
--- a/genenetwork-development.scm
+++ b/genenetwork-development.scm
@@ -28,7 +28,6 @@
              ((gnu packages admin) #:select (shepherd shadow))
              ((gnu packages base) #:select (gnu-make tar coreutils-minimal))
              ((gnu packages bash) #:select (bash))
-             ((gnu packages bioinformatics) #:select (ccwl) #:prefix guix:)
              ((gnu packages nss) #:select (nss-certs))
              ((gnu packages check) #:select (python-pylint))
              ((gnu packages curl) #:select (curl))
@@ -1043,27 +1042,6 @@ described by CONFIG, a <genenetwork-configuration> object."
 ;;; transform-genenetwork-database
 ;;;
 
-
-;; Unreleased version of ccwl that is required by
-;; transform-genenetwork-database for its graphql library.
-(define ccwl
-  (let ((commit "02677a508b407779f5991a230341e016deb7f69b")
-        (revision "0"))
-    (package
-      (inherit guix:ccwl)
-      (name "ccwl")
-      (version (git-version (package-version guix:ccwl) revision commit))
-      (source
-       (origin
-         (method git-fetch)
-         (uri (git-reference
-               (url "https://github.com/arunisaac/ccwl")
-               (commit commit)))
-         (file-name (git-file-name name version))
-         (sha256
-          (base32
-           "1kxry8y0pibl0x789jrzqkkh2s59ajyinfvrgvd00gkbqldih82r")))))))
-
 ;; guile-sparql tests are broken. Disable them temporarily. The issue
 ;; has been reported upstream at
 ;; https://github.com/roelj/guile-sparql/issues/6
@@ -1108,7 +1086,7 @@ described by CONFIG, a <genenetwork-configuration> object."
 
 (define (transform-genenetwork-database-gexp connection-settings virtuoso-data-dir repository)
   (with-imported-modules '((guix build utils))
-    (with-packages (list ccwl git-minimal gnu-make guile-3.0 guile-dbd-mysql
+    (with-packages (list git-minimal gnu-make guile-3.0 guile-dbd-mysql
                          guile-dbi guile-hashing guile-libyaml guile-sparql
                          guile-zlib nss-certs virtuoso-ose raptor2)
      #~(begin