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GNU Guile API and web service support for GeneNetwork
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2024-05-14
Add missing strain. Remove unused call
Pjotr Prins
2024-05-13
Preparing BXD named for strain output in JSON
Pjotr Prins
2024-05-09
Full test for whether a data-id belongs to the BXD
Pjotr Prins
2024-05-07
Fetch a batch of traits so we can process faster
Pjotr Prins
2024-05-05
Trait IDs fetch in batch
Pjotr Prins
2024-05-05
List data-ids (trait ids) for a batch
Pjotr Prins
2024-02-12
Change lmm mode to 9
Pjotr Prins
2024-01-06
Tracking metadat for GN DB
Pjotr Prins
2024-01-05
Remove extra check and debug flag for gemma run
Pjotr Prins
2024-01-05
Precompute will run gemma and update the DB status
Pjotr Prins
2024-01-04
Use tmpdir and tmp files for transient data
Pjotr Prins
2024-01-04
Use tmpfn for pheno output
Pjotr Prins
2024-01-04
Call precompute with population name - BXD only, for now
Pjotr Prins
2024-01-01
Run gemma-wrapper with metadata
Pjotr Prins
2023-12-21
Precompute
Pjotr Prins
2023-12-02
Mysql: check database is running. And some comments
Pjotr Prins
2023-12-02
Run gemma
Pjotr Prins
2023-11-24
Handle genotypes in gemma module
Pjotr Prins
2023-11-24
Fetch genotype inds from json file
Pjotr Prins
2023-11-21
Adding GEMMA
Pjotr Prins
2023-11-19
Iterating through hits
Pjotr Prins
2023-11-19
Iterate precompute datasets
Pjotr Prins
2023-11-18
Get first BXD dataset for precompute
Pjotr Prins
2023-11-18
Reorganize DB handler and fetch first dataset
Pjotr Prins
2023-11-17
Now we have a list of strain names for the BXD
Pjotr Prins
2023-11-17
First implementation of DB handler
Pjotr Prins
2023-11-16
Move procedures into mysql.scm and add documentation
Pjotr Prins
2023-11-15
Return list of BXD
Pjotr Prins
2023-11-14
Started on precompute script
Pjotr Prins
2023-08-27
Shortnames
Pjotr Prins
2023-08-23
Able to render group data
Pjotr Prins
2023-08-23
Tests pass and set resolves
Pjotr Prins
2023-08-23
Refactoring URIs
Pjotr Prins
2023-08-22
group links
Pjotr Prins
2023-08-22
Remove pk statements
Pjotr Prins
2023-08-21
Getting group info
Pjotr Prins
2023-08-21
Fix missing procedure
Pjotr Prins
2023-08-20
Add gnid to species - still a bug
Pjotr Prins
2023-08-19
Adding test infrastructure and reorganizing modules
Pjotr Prins
2023-08-18
Adding test infrastructure and reorganizing modules - still not happy with ↵
Pjotr Prins
(web uri)
2023-08-12
Add SPARQL prefix
Pjotr Prins
2023-08-06
SPARQL: move into separate module
Pjotr Prins
2023-08-06
memoize: created separate module
Pjotr Prins