| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2025-11-18 | UM-HET3 remove ole-man and add referrers HEAD main | Pjotr Prins | |
| 2025-11-18 | README | Pjotr Prins | |
| 2025-11-03 | Re-add manifest prod | Pjotr Prins | |
| 2025-11-03 | Re-add manifest | Pjotr Prins | |
| 2025-11-03 | Update instructions for running webserver | Pjotr Prins | |
| 2025-11-03 | Use the guix shell one layer up | Pjotr Prins | |
| 2025-11-03 | Add note on guix-shell | Pjotr Prins | |
| 2025-10-04 | Reintroduce my shell | Pjotr Prins | |
| 2025-09-21 | Render subdir of home/aging | Pjotr Prins | |
| 2025-09-21 | Working on aging links | Pjotr Prins | |
| 2025-08-22 | Bump webserve copyrights | Pjotr Prins | |
| 2025-08-12 | Remove fibers as suggested by Arun's patch: | Pjotr Prins | |
| => https://cgit.git.savannah.gnu.org/cgit/guix/mumi.git/commit/?id=897967a84d3f51da2b1cc8c3ee942fd14f4c669b After getting: In procedure accept: Too many open files with GET /dataset/bxd-publish/values/23486.json | |||
| 2025-08-11 | API | Pjotr Prins | |
| 2025-08-07 | Disable .gemma API endpoint | Pjotr Prins | |
| 2025-08-04 | Note on BXD.json - which we should not use | Pjotr Prins | |
| 2025-08-02 | API: endpoint gets trait values for BXD in GEMMA format | Pjotr Prins | |
| 2025-08-02 | Write gemma trait values (pheno file) | Pjotr Prins | |
| 2025-08-02 | API: add .json extension | Pjotr Prins | |
| 2025-08-02 | API: create values endpoint that returns a dict only | Pjotr Prins | |
| 2025-07-30 | Create endpoint for mappable BXD values as dataset/bxd-publish/mapping/values | Pjotr Prins | |
| 2025-07-30 | Create endpoint for dataset/bxd-publish/list | Pjotr Prins | |
| 2025-07-30 | Update on running web server | Pjotr Prins | |
| 2025-07-27 | Update README | Pjotr Prins | |
| 2025-07-22 | Revert "Add missing import." | Munyoki Kilyungi | |
| This reverts commit 57118453a7ab776ec2259f4d59bd4a0c8213d9d0. | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit a2639cac7be578f160c14a4eeb77a23b859bb64a. | |||
| 2025-07-22 | Add missing import. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit 9836105b0c662f8f6e0cf5eb30721d1f1f06976c. | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit 654257a9f7ae12dcf2770fd92df971831b66cdb7. | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-16 | Aliases: make it work in the webserver. You can now try: | Pjotr Prins | |
| curl http://127.0.0.1:8091/gene/aliases/Shh ["9530036O11Rik","Dsh","Hhg1","Hx","Hxl3","M100081","ShhNC","sonic hedgehog","sonic hedgehog signaling molecule"] | |||
| 2025-07-16 | aliases: we now have a list of deduplicatied aliases | Pjotr Prins | |
| 2025-07-16 | Aliases - add example | Pjotr Prins | |
| 2025-07-16 | Wikidata: query for gene aliases | Pjotr Prins | |
| 2025-07-16 | README: Add path to guix-bioinformatics repo | Pjotr Prins | |
| 2025-07-13 | comments on precompute | Pjotr Prins | |
| 2025-07-05 | README | Pjotr Prins | |
| 2025-02-19 | Use a combination of trait-id and first 12 chars of md5 sum. | Munyoki Kilyungi | |
| * scripts/lmdb-publishdata-export.scm (save-dataset-values): Use a trait's name and the first 12 characters of the dataset's md5 checksum in the index, and when storing to path. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-02-19 | Add .aider* to .gitignore. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-02-19 | Add guile script for saving published data to lmdb. | Munyoki Kilyungi | |
| * scripts/lmdb-publishdata-export.scm: New file. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-02-11 | Improve styling for images. | Frederick Muriuki Muriithi | |
| 2025-02-11 | Improve styling for text. | Frederick Muriuki Muriithi | |
| 2025-02-11 | Display the markdown with the default GN template. | Frederick Muriuki Muriithi | |
| 2025-02-11 | Add a default page template and styling for genenetwork-like pages. | Frederick Muriuki Muriithi | |
| 2025-02-11 | Add an endpoint for gnqa. | Frederick Muriuki Muriithi | |
| 2024-12-17 | Add gn-guile.sh runner script. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-12-16 | Revert "Add gn-guile-server script." | Munyoki Kilyungi | |
| This reverts commit 709bf8076c4d1d94ba42e151c202a9ffeac048fb. | |||
| 2024-12-16 | Add gn-guile-server script. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-11-19 | Make repo a channel. Link to guix-bioinformatics. | Frederick Muriuki Muriithi | |
| * .guix-channel: Specify this channel's details. Add "guix-bioinformatics" channel as a dependency. * .guix/modules/gn-guile.scm: Inherit package definition from the guix-bioinformatics definition of this package. * guix.scm: Symlink to .guix/modules/gn-guile.scm | |||
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index : gn-guile | |
| GNU Guile API and web service support for GeneNetwork |
| about summary refs log tree commit diff |