| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 27 hours | Setup initial CLI configurations. fredm/use-cli-args | Frederick Muriuki Muriithi | |
| We want to move away from using global values for our configuration. In this respect, we provide a way to provide configurations at application startup via CLI arguments. | |||
| 30 hours | Improve config variables' names. HEAD main | Frederick Muriuki Muriithi | |
| Provide better names for the configuration variables to more clearly indicate what the variable is concerned with. | |||
| 30 hours | Sync gn-docs from remote. | Frederick Muriuki Muriithi | |
| To ensure we have the latest changes, sync gn-docs before every edit. | |||
| 2026-02-18 | Add notes for dependencies in manifest file. | Frederick Muriuki Muriithi | |
| 2026-02-18 | Update invocation documentation. | Frederick Muriuki Muriithi | |
| 2026-02-18 | Import from gn-machines rather than guix-bioinformatics. | Frederick Muriuki Muriithi | |
| 2026-02-18 | Rename variable for clarity. | Frederick Muriuki Muriithi | |
| The 'CGIT_REPO_PATH' envvar and corresponding global `+cgit-repo-path+` configuration variable were both pointing to the bare repo that's upstream somewhere. Using the term "bare" rather than "cgit" is more descriptive of what the variable is concerned with, rather than the term "cgit" which is dependent on a specific forge/forge-type. | |||
| 2026-02-18 | Remove extra massive join on extra (p, o). | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-23 | Add content negotiation when fetching RDF metadata. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-14 | Add RDF end-points for resolving RDF urls. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2026-01-06 | Delete dead comments. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-12-19 | Make sure to close DB | Pjotr Prins | |
| 2025-12-19 | Make sure to close DB | Pjotr Prins | |
| 2025-11-18 | UM-HET3 remove ole-man and add referrers | Pjotr Prins | |
| 2025-11-18 | README | Pjotr Prins | |
| 2025-11-03 | Re-add manifest prod | Pjotr Prins | |
| 2025-11-03 | Re-add manifest | Pjotr Prins | |
| 2025-11-03 | Update instructions for running webserver | Pjotr Prins | |
| 2025-11-03 | Use the guix shell one layer up | Pjotr Prins | |
| 2025-11-03 | Add note on guix-shell | Pjotr Prins | |
| 2025-10-04 | Reintroduce my shell | Pjotr Prins | |
| 2025-09-21 | Render subdir of home/aging | Pjotr Prins | |
| 2025-09-21 | Working on aging links | Pjotr Prins | |
| 2025-08-22 | Bump webserve copyrights | Pjotr Prins | |
| 2025-08-12 | Remove fibers as suggested by Arun's patch: | Pjotr Prins | |
| => https://cgit.git.savannah.gnu.org/cgit/guix/mumi.git/commit/?id=897967a84d3f51da2b1cc8c3ee942fd14f4c669b After getting: In procedure accept: Too many open files with GET /dataset/bxd-publish/values/23486.json | |||
| 2025-08-11 | API | Pjotr Prins | |
| 2025-08-07 | Disable .gemma API endpoint | Pjotr Prins | |
| 2025-08-04 | Note on BXD.json - which we should not use | Pjotr Prins | |
| 2025-08-02 | API: endpoint gets trait values for BXD in GEMMA format | Pjotr Prins | |
| 2025-08-02 | Write gemma trait values (pheno file) | Pjotr Prins | |
| 2025-08-02 | API: add .json extension | Pjotr Prins | |
| 2025-08-02 | API: create values endpoint that returns a dict only | Pjotr Prins | |
| 2025-07-30 | Create endpoint for mappable BXD values as dataset/bxd-publish/mapping/values | Pjotr Prins | |
| 2025-07-30 | Create endpoint for dataset/bxd-publish/list | Pjotr Prins | |
| 2025-07-30 | Update on running web server | Pjotr Prins | |
| 2025-07-27 | Update README | Pjotr Prins | |
| 2025-07-22 | Revert "Add missing import." | Munyoki Kilyungi | |
| This reverts commit 57118453a7ab776ec2259f4d59bd4a0c8213d9d0. | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit a2639cac7be578f160c14a4eeb77a23b859bb64a. | |||
| 2025-07-22 | Add missing import. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit 9836105b0c662f8f6e0cf5eb30721d1f1f06976c. | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-22 | Revert "Test webhook." | Munyoki Kilyungi | |
| This reverts commit 654257a9f7ae12dcf2770fd92df971831b66cdb7. | |||
| 2025-07-22 | Test webhook. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2025-07-16 | Aliases: make it work in the webserver. You can now try: | Pjotr Prins | |
| curl http://127.0.0.1:8091/gene/aliases/Shh ["9530036O11Rik","Dsh","Hhg1","Hx","Hxl3","M100081","ShhNC","sonic hedgehog","sonic hedgehog signaling molecule"] | |||
| 2025-07-16 | aliases: we now have a list of deduplicatied aliases | Pjotr Prins | |
| 2025-07-16 | Aliases - add example | Pjotr Prins | |
| 2025-07-16 | Wikidata: query for gene aliases | Pjotr Prins | |
| 2025-07-16 | README: Add path to guix-bioinformatics repo | Pjotr Prins | |
| 2025-07-13 | comments on precompute | Pjotr Prins | |
 |
index : gn-guile | |
| GNU Guile API and web service support for GeneNetwork |
| about summary refs log tree commit diff |