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authorPjotr Prins2024-01-06 18:23:27 +0100
committerPjotr Prins2024-01-06 18:23:27 +0100
commit1c46296016ead8a5fa17ff291eeabbd0a0c63e4b (patch)
tree2ea04dab40e91eef942fc2d6abec5530f1112ed6 /scripts/precompute
parent902cf907e9b315f52b2ef3b4b791e492a87e6437 (diff)
downloadgn-guile-1c46296016ead8a5fa17ff291eeabbd0a0c63e4b.tar.gz
Tracking metadat for GN DB
Diffstat (limited to 'scripts/precompute')
-rwxr-xr-xscripts/precompute/precompute-hits.scm4
1 files changed, 2 insertions, 2 deletions
diff --git a/scripts/precompute/precompute-hits.scm b/scripts/precompute/precompute-hits.scm
index f33e7e9..8f27bbe 100755
--- a/scripts/precompute/precompute-hits.scm
+++ b/scripts/precompute/precompute-hits.scm
@@ -99,12 +99,12 @@ ssh -L 3306:127.0.0.1:3306 -f -N tux02.genenetwork.org
((id . value) (cons (assoc-ref bxd-strains id) value)
)))
id_traits))
- (display traits)
+ ;; (display traits)
;; (if (= 0 (length non-bxd))
(if (eq? non-bxd '())
(begin
(set-precompute-hit-status! db data-id-str "GEMMA-START")
- (run-gemma "BXD" data-id name trait-name traits)
+ (run-gemma "BXD" data-id probeset-id probesetfreeze-id name trait-name traits)
(set-precompute-hit-status! db data-id-str "GEMMA-DONE"))
;; disable precompute if non-bxd, for now, so it won't try again
(set-precompute-hit-status! db data-id-str "NON-BXD"))