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# Deploying GeneNetwork CD
## Prerequisites
Ensure you have `fzf' installed and Guix is set up with your preferred channel configuration.
## Step 1: Pull the Latest Profiles
```
guix pull -C channels.scm -p ~/.guix-extra-profiles/gn-machines --allow-downgrades
guix pull -C channels.scm -p ~/.guix-extra-profiles/gn-machines-shepherd-upgrade --allow-downgrades
```
## Step 2: Source the Correct Profile
```
. ,choose-profile
```
### Contents of `,choose-profile'
This script lets you interactively select a profile using `fzf':
```
#!/bin/env sh
export GUIX_PROFILE="$(guix package --list-profiles | fzf --multi)"
. "$GUIX_PROFILE/etc/profile"
hash guix
echo "Currently using: $GUIX_PROFILE"
```
## Step 3: Verify the Profile
```
guix describe
```
## Step 4: Pull the Latest Code
```
cd gn-machines
git pull
```
## Step 5: Run the Deployment Script
```
./genenetwork-development-deploy.sh
```
## Step 6: Restart the Development Container
```
sudo systemctl restart genenetwork-development-container
```
## Step 7: Verify Changes
Manually confirm that the intended changes were applied correctly.
# Accessing the Development Container on tux02
To enter the running container shell, ensure you're using the *parent* PID of the `shepherd' process.
## Step 1: Identify the Correct PID
Use this command to locate the correct container parent process:
```
ps -u root -f --forest | grep -A4 '/usr/local/bin/genenetwork-development-container' | grep shepherd
```
## Step 2: Enter the Container
Replace `46804' with your actual parent PID:
```
sudo /home/bonfacem/.config/guix/current/bin/guix container exec 46804 \
/gnu/store/m6c5hgqg569mbcjjbp8l8m7q82ascpdl-bash-5.1.16/bin/bash \
--init-file /home/bonfacem/.guix-profile/etc/profile --login
```
## Notes
* Ensure the PID is the container’s *shepherd parent*, not a child process.
* Always double-check your environment and profiles before deploying.
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