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authorPjotr Prins2023-03-23 10:34:19 +0100
committerPjotr Prins2023-03-23 10:34:19 +0100
commit6610f72ba9bca6c5cf17e32fd97d3db87d29d9f5 (patch)
tree46b89bd2a8c0073adaf981c466526400285db7de /topics/systems/mariadb
parent2fa5308f47fa71a8d517c141e340cefa64506bd6 (diff)
downloadgn-gemtext-6610f72ba9bca6c5cf17e32fd97d3db87d29d9f5.tar.gz
Wrote out precompute qtlreaper scores
Diffstat (limited to 'topics/systems/mariadb')
-rw-r--r--topics/systems/mariadb/precompute-mapping-input-data.gmi6
1 files changed, 3 insertions, 3 deletions
diff --git a/topics/systems/mariadb/precompute-mapping-input-data.gmi b/topics/systems/mariadb/precompute-mapping-input-data.gmi
index da46bf7..77cfdd2 100644
--- a/topics/systems/mariadb/precompute-mapping-input-data.gmi
+++ b/topics/systems/mariadb/precompute-mapping-input-data.gmi
@@ -106,8 +106,8 @@ From this exercise we can conclude:
* Existing precomputed values are by linear regression (old QTLreaper)
* Only one highest score is stored
* Every time the script is run *all* datasets are recomputed
-* The _old valuse in the table are not touched by the script
+* The '_old' named values in the table are not touched by the script
* h2 and mean are not updated
-* No significance score is computed
+* No significance score is computed (needs permutations)
-Rob voiced a wish to retain all scores (at least above 1.0).
+Rob voiced a wish to retain all scores (at least those above 1.0). This is not feasible in mariadb, but we can retain GEMMA output if stored efficiently.