From 6610f72ba9bca6c5cf17e32fd97d3db87d29d9f5 Mon Sep 17 00:00:00 2001 From: Pjotr Prins Date: Thu, 23 Mar 2023 10:34:19 +0100 Subject: Wrote out precompute qtlreaper scores --- topics/systems/mariadb/precompute-mapping-input-data.gmi | 6 +++--- 1 file changed, 3 insertions(+), 3 deletions(-) (limited to 'topics/systems/mariadb') diff --git a/topics/systems/mariadb/precompute-mapping-input-data.gmi b/topics/systems/mariadb/precompute-mapping-input-data.gmi index da46bf7..77cfdd2 100644 --- a/topics/systems/mariadb/precompute-mapping-input-data.gmi +++ b/topics/systems/mariadb/precompute-mapping-input-data.gmi @@ -106,8 +106,8 @@ From this exercise we can conclude: * Existing precomputed values are by linear regression (old QTLreaper) * Only one highest score is stored * Every time the script is run *all* datasets are recomputed -* The _old valuse in the table are not touched by the script +* The '_old' named values in the table are not touched by the script * h2 and mean are not updated -* No significance score is computed +* No significance score is computed (needs permutations) -Rob voiced a wish to retain all scores (at least above 1.0). +Rob voiced a wish to retain all scores (at least those above 1.0). This is not feasible in mariadb, but we can retain GEMMA output if stored efficiently. -- cgit v1.2.3