diff options
| author | GregFa | 2023-06-27 20:58:07 -0500 |
|---|---|---|
| committer | BonfaceKilz | 2023-07-05 01:32:21 +0300 |
| commit | b5113dc72a27d2c20432e46c80f8110eb25dbc45 (patch) | |
| tree | bf7ecb4482aeedcc0de186f7291cd0b9595cf250 /issues/fix-genotype-filename-HSNIH-Palmer.gmi | |
| parent | cccdc8547686a81f7a62940e170fd0b38f700594 (diff) | |
| download | gn-gemtext-b5113dc72a27d2c20432e46c80f8110eb25dbc45.tar.gz | |
added new issues: bulklmm, Pluto notebooks, geno file HSNIH Palmer
Diffstat (limited to 'issues/fix-genotype-filename-HSNIH-Palmer.gmi')
| -rw-r--r-- | issues/fix-genotype-filename-HSNIH-Palmer.gmi | 30 |
1 files changed, 30 insertions, 0 deletions
diff --git a/issues/fix-genotype-filename-HSNIH-Palmer.gmi b/issues/fix-genotype-filename-HSNIH-Palmer.gmi new file mode 100644 index 0000000..246b230 --- /dev/null +++ b/issues/fix-genotype-filename-HSNIH-Palmer.gmi @@ -0,0 +1,30 @@ +## Fix genotype filename HSNIH-Palmer + +## Tags + +* assigned: pjotrp +* type: bug fix +* priority: high + +## Description + + +When using the Rest API to get the groups for "rat", it mentions the group HSNIH-Palmer. +But the REST API to obtain the geno file(http://gn2.genenetwork.org/api/v_pre1/gentotypes/HSNIH-Palmer.geno) failed. +The file of HSNIF-Palmer has actually a different name from what is expected; we have to use "HSNIH-Palmer_true" instead. +On GeneNetwork website, the following query does not return results from the search. + +Dataset try to access: HSNIH-Palmer + +Issues with genotyped data: +Used this query: + +Species: Rat + +Group: NIH Heterogeneous Stock (Palmer) + +Type: DNA Markers and SNPs + +Dataset: HSNIH-Palmer Genotypes + +Get Any: * |