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| author | Munyoki Kilyungi | 2023-06-19 12:39:19 +0300 |
|---|---|---|
| committer | Munyoki Kilyungi | 2023-06-19 12:39:19 +0300 |
| commit | 1125ccac0b8f73d4e8ffcc2d7b2828c0096b115e (patch) | |
| tree | 29752d6644baa521e19307cae087848351dcb224 /issues/add-genotype-files-to-rdf.gmi | |
| parent | 23e5b245eecef5ae1c33a6fab2803522d9cf592a (diff) | |
| download | gn-gemtext-1125ccac0b8f73d4e8ffcc2d7b2828c0096b115e.tar.gz | |
Create new issue on adding genotype files to RDF
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'issues/add-genotype-files-to-rdf.gmi')
| -rw-r--r-- | issues/add-genotype-files-to-rdf.gmi | 14 |
1 files changed, 14 insertions, 0 deletions
diff --git a/issues/add-genotype-files-to-rdf.gmi b/issues/add-genotype-files-to-rdf.gmi new file mode 100644 index 0000000..85ac39c --- /dev/null +++ b/issues/add-genotype-files-to-rdf.gmi @@ -0,0 +1,14 @@ +# Add genotype file paths to RDF + +## Tags +* assigned: bonfacem +* type: bug +* status: open, in progress + +In Penguin2, genotype files are located in: /export/data/genenetwork/genotype_files/genotype. Each genotype files has an identifier to a dataset it refers to: + +``` +@name:B6D2 +``` + +Dump the above metadata in RDF. When we transition fully to an LMDB store, update the RDF node with a pointer to the LMDB store. |