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diff --git a/rdf-documentation/publication-metadata.md b/rdf-documentation/publication-metadata.md new file mode 100644 index 0000000..018f6da --- /dev/null +++ b/rdf-documentation/publication-metadata.md @@ -0,0 +1,51 @@ +# Publications Metadata +## 'publication' + +## Generated Triples: + +The following SQL query was executed: + +```sql +SELECT IF(Publication.PubMed_ID IS NULL, '', CONVERT(Publication.PubMed_Id, INT)) AS pmid, Publication.Id, IFNULL(PubMed_ID, '') AS pubmedId, Publication.Title, Publication.Journal, Publication.Volume, Publication.Pages, Publication.Month, IF(Publication.Year = 0, NULL, Publication.Year) AS Year, Publication.Authors, Publication.Abstract FROM Publication +``` + +The above query results to triples that have the form: + +```text +pubmed:pmid -> rdf:type -> fabio:ResearchPaper +pubmed:pmid -> fabio:hasPubMedId -> pubmed:pubmedId +pubmed:pmid -> dct:title -> Publication(Title) +pubmed:pmid -> fabio:Journal -> Publication(Journal) +pubmed:pmid -> prism:volume -> Publication(Volume) +pubmed:pmid -> fabio:page -> Publication(Pages) +pubmed:pmid -> prism:publicationDate -> "Publication(Month)"^^xsd:gMonth +pubmed:pmid -> fabio:hasPublicationYear -> "Year"^^xsd:gYear +pubmed:pmid -> dct:abstract -> PublicationAbstract +pubmed:pmid -> dct:creator -> PublicationAuthors +``` +Here's an example query: + +```sparql +PREFIX gnt: <http://genenetwork.org/terms/> +PREFIX fabio: <http://purl.org/spar/fabio/> +PREFIX dct: <http://purl.org/dc/terms/> +PREFIX prism: <http://prismstandard.org/namespaces/basic/2.0/> +PREFIX gn: <http://genenetwork.org/id/> +PREFIX gnc: <http://genenetwork.org/category/> +PREFIX pubmed: <http://rdf.ncbi.nlm.nih.gov/pubmed/> +PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#> +PREFIX xsd: <http://www.w3.org/2001/XMLSchema#> +PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> + +SELECT * WHERE { + ?s rdf:type fabio:ResearchPaper . + ?s ?p ?o . +} +``` + +Expected Result: + +```rdf +gn:unpublished_1 rdf:type fabio:ResearchPaper . +``` + |