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Diffstat (limited to 'general/datasets/Hqfneoc_1210v2_rankinv/platform.rtf')
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diff --git a/general/datasets/Hqfneoc_1210v2_rankinv/platform.rtf b/general/datasets/Hqfneoc_1210v2_rankinv/platform.rtf new file mode 100644 index 0000000..f0c5210 --- /dev/null +++ b/general/datasets/Hqfneoc_1210v2_rankinv/platform.rtf @@ -0,0 +1,7 @@ +<p><strong>Illumina Sentrix Mouse-6.1 BeadArray Platform (ILM6v1.1): </strong>The <a class="fs14" href="http://www.illumina.com" target="_blank">Mouse6.1</a> array consists of 46,643 unique probe sequences, each 50 nucleotides in length, that have been arrayed on glass slides using a novel bead technology.</p>
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+<p>Dunning M, Smith M, Thorne N, Tavare S (2006) beadarray: An R package to analyse Illumina BeadArrays. R News (the Newsletter of the P Project) 6:17-23. (see pages 17-23 of http://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf).</p>
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+<p>ANNOTATION: In summer of 2008, Xusheng Wang and Robert W. Williams reannotated the Illumina Mouse-6.1 array content. This new annotation is now incorporated into GeneNetwork. For 46643 probes on the Mouse 6.1 array platform (including control probes) we have identified XXXXX NCBI Entrez Gene IDs; XXXXX matched human Gene IDs; XXXXX matched rat Gene IDs; XXXXX NCBI HomoloGene IDs; and XXXXX OMIM IDs.</p>
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+<p>Position data for the 50-mer Illumina Mouse-6 array were initially downloaded from Sanger at http://www.sanger.ac.uk/Users/avc/Illumina/Mouse-6_V1.gff.gz but we then updated all positions by BLAT analysis from mm6 positions to mm8 positions (Hongqiang Li).</p>
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