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Diffstat (limited to 'api/questions-to-ask-GN.md')
| -rw-r--r-- | api/questions-to-ask-GN.md | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/api/questions-to-ask-GN.md b/api/questions-to-ask-GN.md index 254fb82..9b26168 100644 --- a/api/questions-to-ask-GN.md +++ b/api/questions-to-ask-GN.md @@ -15,6 +15,7 @@ curl https://genenetwork.org/api/v_pre1/ {"hello":"world"} ``` + ## Return species * Current: @@ -37,6 +38,20 @@ curl -s https://genenetwork.org/api/v_pre1/species|jq '.[0:2]' ] ``` +* Current SPARQL: + +https://sparql.genenetwork.org/sparql?default-graph-uri=&qtxt=prefix%20gn%3A%20%3Chttp%3A%2F%2Fgenenetwork.org%2F%3E%0A%0ASELECT%20*%20WHERE%20%7B%0A%3Fs%20rdf%3Atype%20gn%3Aspecies%20.%0A%7D&format=text%2Fhtml&timeout=0&signal_void=on + +What is known about mouse? + +``` +SELECT * WHERE { + gn:species_mus_musculus ?p ?o. +} +``` + +https://sparql.genenetwork.org/sparql?default-graph-uri=&qtxt=prefix%20gn%3A%20%3Chttp%3A%2F%2Fgenenetwork.org%2F%3E%0A%0ASELECT%20*%20WHERE%20%7B%0Agn%3Aspecies_mus_musculus%20%3Fp%20%3Fo.%0A%7D&format=text%2Fhtml&timeout=0&signal_void=on + ## Return available groups/populations * Current: https://genenetwork.org/api/v_pre1/groups/mouse @@ -347,6 +362,18 @@ Next the GN3 code base which is all supposed to be REST API: * https://github.com/genenetwork/genenetwork3/tree/main/gn3/api + +is GN3 live? + +``` +curl -s http://genenetwork.org/api3/api/version +"1.0" +``` + Finally the SPARQL endpoint which is driven by RDF generated with * https://github.com/genenetwork/dump-genenetwork-database + +Visit + +* https://sparql.genenetwork.org/sparql |