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authorMunyoki Kilyungi2023-08-15 21:15:11 +0300
committerMunyoki Kilyungi2023-08-15 21:15:11 +0300
commitbe450b02198f08363986aecfd5227752d2e4ca72 (patch)
treebdcd718c86fc7366a5cfa0b234ff307f0c15c052 /rdf-documentation/dump-species-metadata.md
parenta9472810f601b48c643724c9186ec44721732fa7 (diff)
downloadgn-docs-be450b02198f08363986aecfd5227752d2e4ca72.tar.gz
Update auto-generated docs
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
Diffstat (limited to 'rdf-documentation/dump-species-metadata.md')
-rw-r--r--rdf-documentation/dump-species-metadata.md14
1 files changed, 7 insertions, 7 deletions
diff --git a/rdf-documentation/dump-species-metadata.md b/rdf-documentation/dump-species-metadata.md
index 6a3c485..495905a 100644
--- a/rdf-documentation/dump-species-metadata.md
+++ b/rdf-documentation/dump-species-metadata.md
@@ -244,18 +244,18 @@ gn:Mus_musculus gnt:organism taxon:10090 .
The following SQL query was executed:
```sql
-SELECT CAST(CONVERT(BINARY CONVERT(Strain.Name USING latin1) USING utf8) AS VARCHAR(15000)) AS StrainName, Species.Fullname, Strain.Name, IF ((Strain.Name2 != Strain.Name), Strain.Name2, '') AS Name2, IF ((Strain.Alias != Strain.Name), Strain.Alias, '') AS Alias, IF ((Strain.Symbol != Strain.Name), Strain.Symbol, '') AS Symbol FROM Strain LEFT JOIN Species ON Strain.SpeciesId = Species.SpeciesId
+SELECT Strain.Name, Species.Fullname, Strain.Name, IF ((Strain.Name2 != Strain.Name), Strain.Name2, '') AS Name2, IF ((Strain.Alias != Strain.Name), Strain.Alias, '') AS Alias, IF ((Strain.Symbol != Strain.Name), Strain.Symbol, '') AS Symbol FROM Strain LEFT JOIN Species ON Strain.SpeciesId = Species.SpeciesId
```
The above query results to triples that have the form:
```text
-gn:Strainname -> rdf:type -> gnc:strain
-gn:Strainname -> gnt:species -> gn:Species_fullname
-gn:Strainname -> rdfs:label -> StrainName
-gn:Strainname -> rdfs:label -> Name2
-gn:Strainname -> gnt:alias -> Alias
-gn:Strainname -> gnt:symbol -> Symbol
+gn:Strain_name_ -> rdf:type -> gnc:strain
+gn:Strain_name_ -> gnt:species -> gn:Species_fullname
+gn:Strain_name_ -> rdfs:label -> StrainName
+gn:Strain_name_ -> rdfs:label -> Name2
+gn:Strain_name_ -> gnt:alias -> Alias
+gn:Strain_name_ -> gnt:symbol -> Symbol
```
Here's an example query: