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authorAlexander Kabui2024-09-08 05:04:04 -0500
committerBonface2024-09-08 05:04:04 -0500
commite5fd40d76bc045630d089c4578b7933f9cd43754 (patch)
tree02085bab89a06cdce26d1aa45e1862bfec9ab866 /general
parentbb9f8c9b046939863838f6b54fcaac0bb8f168e9 (diff)
downloadgn-docs-e5fd40d76bc045630d089c4578b7933f9cd43754.tar.gz
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-<p><a class="fs14" href="http://www.genenetwork.org/genotypes/AKXD.geno">Download</a> the entire AKXD genotype file used in GeneNetwork (n = 1352 markers with useful strain distribution pattens from a total of 5448 informative markers). We have modified the orginal <a class="fs14" href="http://www.well.ox.ac.uk/mouse/INBREDS/">Wellcome-CTC</a> genotypes by adding selected microsatellite markers. We have also curate the data and have removed somewhat improbable double-recombinant haplotypes and by imputing genotypes for a few untyped strains using very tightly linked markers. This genotype &quot;smoothing&quot; may remove some genuine recombinations and may result in linkage maps that will be very slightly conservative.</p>
+<p><a href="http://www.genenetwork.org/genotypes/AKXD.geno">Download</a> the entire AKXD genotype file used in GeneNetwork (n = 1352 markers with useful strain distribution pattens from a total of 5448 informative markers). We have modified the original <a href="http://www.well.ox.ac.uk/mouse/INBREDS/">Wellcome-CTC</a> genotypes by adding selected microsatellite markers. We have also curate the data and have removed somewhat improbable double-recombinant haplotypes and by imputing genotypes for a few untyped strains using very tightly linked markers. This genotype &quot;smoothing&quot; may remove some genuine recombinations and may result in linkage maps that will be very slightly conservative.</p>