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| author | Bonface | 2024-02-09 09:41:28 -0600 |
|---|---|---|
| committer | Munyoki Kilyungi | 2024-08-09 13:30:43 +0300 |
| commit | d029d5d7f8ead1f1de8d318045004a4a6f68f5fb (patch) | |
| tree | 33c7ff40e3f953d030ed08f468f7afb1dfcba9e6 /general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf | |
| parent | 769ff7825f5d8d36d541e90534c07f1985899973 (diff) | |
| download | gn-docs-d029d5d7f8ead1f1de8d318045004a4a6f68f5fb.tar.gz | |
Update dataset RTF Files.
Diffstat (limited to 'general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf')
| -rw-r--r-- | general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf b/general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf new file mode 100644 index 0000000..35247b6 --- /dev/null +++ b/general/datasets/UT_ILM_BXD_hipp_NOS_0909/notes.rtf @@ -0,0 +1,23 @@ +<p>Hippocampus 5 Conditions<br />
+Illumina Rank Invariant Normalized; Log2 Transformed and Z-Scored<br />
+Batch and Outlier Analysis on Partek Genomic Suite 6.6<br />
+ANOVA Done with batch (BATCH 1 AND 2); Batch effect removed<br />
+K MOZHUI (KMOZHUI@UTHSC.EDU) 12-Nov-12<br />
+Outliers removed are: 4060001003_A, 4060001010_D, 4060001012_A, 4060001012_C, 4060001012_E, AND 4060001078_A<br />
+Number of samples = 284<br />
+Number of probes = 46643</p>
+
+<ol>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>5Trt</strong> (Nov12) RankInv LRS=(46 999)-> <strong>1331</strong><br />
+ ProbeSetID:ILM3440048 Gene:Cdkl2 Max LRS=<strong>192</strong></li>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>NON</strong> (Nov12) RankInv LRS=(46 999)-> <strong>219</strong><br />
+ ProbeSetID:ILM6350725 Gene:C14orf119 Max LRS=<strong>97.8</strong></li>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>NOS</strong> (Nov12) RankInv LRS=(46 999)-> <strong>404</strong><br />
+ ProbeSetID:ILM3440048 Gene:Cdkl2 Max LRS=<strong>106.6</strong></li>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>NOE</strong> (Nov12) RankInv LRS=(46 999)-> <strong>509</strong><br />
+ ProbeSetID:ILM5270066 Gene:MGC67181 Max LRS=<strong>151</strong></li>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>RSS</strong> (Nov12) RankInv LRS=(46 999)-> <strong>415</strong><br />
+ ProbeSetID:ILM5720687 Gene:Abhd16a Max LRS=<strong>121.7</strong></li>
+ <li>UTHSC Hippocampus Illumina v6.1 <strong>RSE</strong> (Nov12) RankInv LRS=(46 999)-> <strong>421</strong><br />
+ ProbeSetID:ILM6350725 Gene:C14orf119 Max LRS=<strong>144.1</strong></li>
+</ol>
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