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| author | Bonface | 2024-02-13 23:52:26 -0600 |
|---|---|---|
| committer | Munyoki Kilyungi | 2024-08-09 13:30:43 +0300 |
| commit | b2feda451ccfbeaed02dce9088d6dd228cf15861 (patch) | |
| tree | 3dd2883524985114070a7770cd2e9f9bd7eb1848 /general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf | |
| parent | d029d5d7f8ead1f1de8d318045004a4a6f68f5fb (diff) | |
| download | gn-docs-b2feda451ccfbeaed02dce9088d6dd228cf15861.tar.gz | |
Update dataset RTF Files.
Diffstat (limited to 'general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf')
| -rw-r--r-- | general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf | 3 |
1 files changed, 3 insertions, 0 deletions
diff --git a/general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf b/general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf new file mode 100644 index 0000000..33266b5 --- /dev/null +++ b/general/datasets/Ncsu_droswb_lc_rma_0111/processing.rtf @@ -0,0 +1,3 @@ +<p>Our measure of expression for each probe set was the median log2 signal intensity of perfect-match probes without SFPs. We used negative control probes to estimate the background intensity, and removed probes below this threshold.</p>
+
+<p>Data may have been normalized prior to entry into GeneNetwork using 2z + 8 transform. This method simply stabilizes the variance of all array data sets, and resets the z score to 8 (rather than 0).</p>
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