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| author | Bonface | 2024-02-13 23:52:26 -0600 |
|---|---|---|
| committer | Munyoki Kilyungi | 2024-08-09 13:30:43 +0300 |
| commit | b2feda451ccfbeaed02dce9088d6dd228cf15861 (patch) | |
| tree | 3dd2883524985114070a7770cd2e9f9bd7eb1848 /general/datasets/Hqfneoc_0208_rankinv/platform.rtf | |
| parent | d029d5d7f8ead1f1de8d318045004a4a6f68f5fb (diff) | |
| download | gn-docs-b2feda451ccfbeaed02dce9088d6dd228cf15861.tar.gz | |
Update dataset RTF Files.
Diffstat (limited to 'general/datasets/Hqfneoc_0208_rankinv/platform.rtf')
| -rw-r--r-- | general/datasets/Hqfneoc_0208_rankinv/platform.rtf | 7 |
1 files changed, 7 insertions, 0 deletions
diff --git a/general/datasets/Hqfneoc_0208_rankinv/platform.rtf b/general/datasets/Hqfneoc_0208_rankinv/platform.rtf new file mode 100644 index 0000000..f0c5210 --- /dev/null +++ b/general/datasets/Hqfneoc_0208_rankinv/platform.rtf @@ -0,0 +1,7 @@ +<p><strong>Illumina Sentrix Mouse-6.1 BeadArray Platform (ILM6v1.1): </strong>The <a class="fs14" href="http://www.illumina.com" target="_blank">Mouse6.1</a> array consists of 46,643 unique probe sequences, each 50 nucleotides in length, that have been arrayed on glass slides using a novel bead technology.</p>
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+<p>Dunning M, Smith M, Thorne N, Tavare S (2006) beadarray: An R package to analyse Illumina BeadArrays. R News (the Newsletter of the P Project) 6:17-23. (see pages 17-23 of http://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf).</p>
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+<p>ANNOTATION: In summer of 2008, Xusheng Wang and Robert W. Williams reannotated the Illumina Mouse-6.1 array content. This new annotation is now incorporated into GeneNetwork. For 46643 probes on the Mouse 6.1 array platform (including control probes) we have identified XXXXX NCBI Entrez Gene IDs; XXXXX matched human Gene IDs; XXXXX matched rat Gene IDs; XXXXX NCBI HomoloGene IDs; and XXXXX OMIM IDs.</p>
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+<p>Position data for the 50-mer Illumina Mouse-6 array were initially downloaded from Sanger at http://www.sanger.ac.uk/Users/avc/Illumina/Mouse-6_V1.gff.gz but we then updated all positions by BLAT analysis from mm6 positions to mm8 positions (Hongqiang Li).</p>
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