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| author | Bonface | 2024-02-09 09:41:28 -0600 |
|---|---|---|
| committer | Munyoki Kilyungi | 2024-08-09 13:30:43 +0300 |
| commit | d029d5d7f8ead1f1de8d318045004a4a6f68f5fb (patch) | |
| tree | 33c7ff40e3f953d030ed08f468f7afb1dfcba9e6 /general/datasets/Hipp_Illumina_Rank_1006/platform.rtf | |
| parent | 769ff7825f5d8d36d541e90534c07f1985899973 (diff) | |
| download | gn-docs-d029d5d7f8ead1f1de8d318045004a4a6f68f5fb.tar.gz | |
Update dataset RTF Files.
Diffstat (limited to 'general/datasets/Hipp_Illumina_Rank_1006/platform.rtf')
| -rw-r--r-- | general/datasets/Hipp_Illumina_Rank_1006/platform.rtf | 9 |
1 files changed, 9 insertions, 0 deletions
diff --git a/general/datasets/Hipp_Illumina_Rank_1006/platform.rtf b/general/datasets/Hipp_Illumina_Rank_1006/platform.rtf new file mode 100644 index 0000000..cb0e31f --- /dev/null +++ b/general/datasets/Hipp_Illumina_Rank_1006/platform.rtf @@ -0,0 +1,9 @@ +<blockquote>
+<p><strong>Illumina Sentrix Mouse-6 BeadArray Platform: </strong>The <a class="fs14" href="http://www.illumina.com" target="_blank">Mouse6</a> array consists of 46,116 unique probe sequences, each 50 nucleotides in length, that have been arrayed on glass slides using a novel bead technology.</p>
+
+<p>Dunning M, Smith M, Thorne N, Tavare S (2006) beadarray: An R package to analyse Illumina BeadArrays. R News (the Newsletter of the P Project) 6:17-23. (see pages 17-23 of http://CRAN.R-project.org/doc/Rnews/Rnews_2006-5.pdf).</p>
+
+<p>ANNOTATION: In spring of 2007, Robert W. Williams and Hongqiang Li reannotated the Illumina Mouse-6 array content. This new annotation is now incorporated into GeneNetwork. For 46166 probes on the Mouse 6 array platform (including control probes) we have identified 35975 NCBI Entrez Gene IDs; 26481 matched human Gene IDs; 23899 matched rat Gene IDs; 26883 NCBI HomoloGene IDs; and 12791 OMIM IDs.</p>
+
+<p>Position data for the 50-mer Illumina Mouse-6 array were initially downloaded from Sanger at http://www.sanger.ac.uk/Users/avc/Illumina/Mouse-6_V1.gff.gz but we then updated all positions by BLAT analysis from mm6 positions to mm8 positions (Hongqiang Li).</p>
+</blockquote>
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