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authorBonface2024-02-09 09:41:28 -0600
committerMunyoki Kilyungi2024-08-09 13:30:43 +0300
commitd029d5d7f8ead1f1de8d318045004a4a6f68f5fb (patch)
tree33c7ff40e3f953d030ed08f468f7afb1dfcba9e6 /general/datasets/GTEx_log2_CerebC_0314/platform.rtf
parent769ff7825f5d8d36d541e90534c07f1985899973 (diff)
downloadgn-docs-d029d5d7f8ead1f1de8d318045004a4a6f68f5fb.tar.gz
Update dataset RTF Files.
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+<p>Expression</p>
+
+<p>RPKM data are used as produced by <a href="http://www.broadinstitute.org/cancer/cga/rna-seqc" target="_blank">RNA-SeQC</a>. Filter on &gt;=10 individuals having &gt;0.1RPKM. Log and quantile normalize the expression values across all samples. Outlier correction: for each gene, rank values across samples then map to a standard normal.</p>