Rename GN2-API-documentation.md -> GN3-REST-API-Implementation.md.

Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>

1 files changed, 0 insertions, 962 deletions

diff --git a/api/GN2-API-documentation.md b/api/GN2-API-documentation.md
deleted file mode 100644
index c7e6a0e..0000000
--- a/api/GN2-API-documentation.md
+++ /dev/null
@@ -1,962 +0,0 @@
-# API Endpoints
-
-The following end-points are available to all users.  The result of every query is json-ld.
-
-## GET /metadata/species
-
-Returns a list of species.
-
-```
-curl localhost:8080/api/metadata/species
-```
-
-Example Result:
-
-```
-{
-  "@context": {
-    "alternateName": "skos:altLabel",
-    "data": "@graph",
-    "family": "gnt:family",
-    "fullName": "skos:prefLabel",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "name": "rdfs:label",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "shortName": "gnt:shortName",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "taxonomicId": "skos:notation",
-    "type": "@type"
-  },
-  "data": [
-    {
-      "alternateName": "Human",
-      "family": "Vertebrates",
-      "fullName": "Human (Homo sapiens, hg19)",
-      "id": "http://genenetwork.org/id/Homo_sapiens",
-      "name": "Homo sapiens",
-      "shortName": "human",
-      "taxonomicId": {
-        "id": "http://purl.uniprot.org/taxonomy/9606"
-      }
-    },
-    [...]
-    {
-      "alternateName": "Soybean",
-      "family": "Plants",
-      "fullName": "Soybean (Glycine max, US DOE JGI-PGF v2 2021)",
-      "id": "http://genenetwork.org/id/Glycine_max",
-      "name": "Glycine max",
-      "shortName": "soybean",
-      "taxonomicId": {
-        "id": "http://purl.uniprot.org/taxonomy/3847"
-      }
-    }
-  ]
-}
-```
-
-## GET /metadata/species/:name
-
-Get a list of species with data available in GN.
-
-```
-curl "localhost:8080/api/metadata/species/bat"
-```
-
-Example Result:
-
-```
-{
-  "@context": {
-    "alternateName": "skos:altLabel",
-    "data": "@graph",
-    "family": "gnt:family",
-    "fullName": "skos:prefLabel",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "name": "rdfs:label",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "shortName": "gnt:shortName",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "taxonomicId": "skos:notation",
-    "type": "@type"
-  },
-  "alternateName": "Bat (Glossophaga soricina)",
-  "family": "Vertebrates",
-  "fullName": "Bat (Glossophaga soricina, gsor23)",
-  "id": "http://genenetwork.org/id/Glossophaga_soricina",
-  "name": "Glossophaga soricina",
-  "shortName": "bat",
-  "taxonomicId": {
-    "id": "http://purl.uniprot.org/taxonomy/27638"
-  }
-}
-
-```
-
-## GET /metadata/groups
-
-Fetch all groups.
-
-```
-curl "localhost:8080/api/metadata/groups"
-```
-
-Example Results:
-
-```
-{
-  "@context": {
-    "code": "gnt:code",
-    "data": "@graph",
-    "family": "gnt:family",
-    "fullName": "skos:prefLabel",
-    "geneticType": "gnt:geneticType",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "mappingMethod": "gnt:mappingMethod",
-    "name": "rdfs:label",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "shortName": "gnt:shortName",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "type": "@type"
-  },
-  "data": [
-    {
-      "code": "BDG",
-      "family": "BXD Individual Data",
-      "fullName": "DOD-BXD-GWI",
-      "geneticType": "intercross",
-      "id": "http://genenetwork.org/id/setDod-bxd-gwi",
-      "mappingMethod": "qtlreaper",
-      "name": "BXD DOD Gulf War Illness"
-    },
-    [...]
-    {
-      "code": "CAN",
-      "fullName": "CANDLE",
-      "id": "http://genenetwork.org/id/setCandle",
-      "name": "Child Development: CANDLE Cohort with Genotypes (TUCI/UTHSC)"
-    }
-  ]
-}
-```
-
-## GET /metadata/groups/:name
-
-Fetch information about a given group given a species' name.
-
-```
-curl "localhost:8080/api/metadata/groups/bat"
-```
-
-Example Results:
-
-```
-{
-  "@context": {
-    "code": "gnt:code",
-    "data": "@graph",
-    "family": "gnt:family",
-    "fullName": "skos:prefLabel",
-    "geneticType": "gnt:geneticType",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "mappingMethod": "gnt:mappingMethod",
-    "name": "rdfs:label",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "shortName": "gnt:shortName",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "type": "@type"
-  },
-  "code": "GSO",
-  "fullName": "GSO",
-  "id": "http://genenetwork.org/id/setGso",
-  "mappingMethod": "qtlreaper",
-  "name": "HUB Winter Gsor families (2014-2022)"
-}
-```
-
-
-## GET /metadata/datasets/:name
-
-Fetch information about a given dataset given it's name.
-
-```
-curl "localhost:8080/api/metadata/datasets/IBR_M_0204_M"
-```
-
-or
-
-```
-curl "localhost:8080/api/metadata/datasets/GN11"
-```
-
-Example Results:
-
-```
-{
-  "@context": {
-    "accessRights": "dct:accessRights",
-    "accessionId": "dct:identifier",
-    "acknowledgement": "gnt:hasAcknowledgement",
-    "altLabel": "skos:altLabel",
-    "caseInfo": "gnt:hasCaseInfo",
-    "classifiedUnder": "xkos:classifiedUnder",
-    "contactPoint": "dcat:contactPoint",
-    "created": "dct:created",
-    "data": "@graph",
-    "dcat": "http://www.w3.org/ns/dcat#",
-    "dct": "http://purl.org/dc/terms/",
-    "description": "dct:description",
-    "ex": "http://example.org/stuff/1.0/",
-    "experimentDesignInfo": "gnt:hasExperimentDesignInfo",
-    "foaf": "http://xmlns.com/foaf/0.1/",
-    "geoSeriesId": "gnt:hasGeoSeriesId",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "inbredSet": "ex:belongsToInbredSet",
-    "info": "ex:info",
-    "label": "rdfs:label",
-    "normalization": "gnt:usesNormalization",
-    "notes": "gnt:hasNotes",
-    "organization": "foaf:Organization",
-    "platform": "ex:platform",
-    "prefLabel": "skos:prefLabel",
-    "processingInfo": "gnt:hasDataProcessingInfo",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "tissue": "ex:tissue",
-    "title": "dct:title",
-    "type": "@type",
-    "xkos": "http://rdf-vocabulary.ddialliance.org/xkos#"
-  },
-  "accessionId": "GN11",
-  "contactPoint": "Michael Miles",
-  "id": "http://genenetwork.org/id/Ibr_m_0204_m",
-  "inbredSet": "BXD Family",
-  "label": "IBR_M_0204_M",
-  "normalization": "MAS5",
-  "platform": {
-    "id": "http://genenetwork.org/id/platformMoe430",
-    "info": "[...]",
-    "label": "Affy Mouse Genome 430A, 430B, 430A 2.0 (GPL339,GPL340)",
-    "prefLabel": "MOE430",
-    "type": "http://genenetwork.org/category/geneChip"
-  },
-  "tissue": {
-    "id": "http://genenetwork.org/id/tissueBrn",
-    "info": "[...]",
-    "label": "Brain mRNA",
-    "type": "http://genenetwork.org/category/tissue"
-  },
-  "type": "dcat:Dataset"
-}
-```
-
-## GET /metadata/datasets/:group/list
-
-List datasets that belong to a given group.
-
-*Parameters:* page(default=0), per-page(default=10)
-
-```
-curl "localhost:8080/api/metadata/datasets/BXD/list"
-```
-
-Example Results:
-
-```
-{
-  "@context": {
-    "classifiedUnder": "xkos:classifiedUnder",
-    "created": "dct:created",
-    "currentPage": "ex:currentPage",
-    "data": "@graph",
-    "dct": "http://purl.org/dc/terms/",
-    "ex": "http://example.org/stuff/1.0/",
-    "id": "@id",
-    "name": "rdfs:label",
-    "pages": "ex:totalCount",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "result": "ex:result",
-    "resultItem": "ex:resultType",
-    "results": "ex:items",
-    "title": "dct:title",
-    "type": "@type",
-    "xkos": "http://rdf-vocabulary.ddialliance.org/xkos#"
-  },
-  "currentPage": 0,
-  "id": "ex:result",
-  "pages": 42,
-  "results": [
-    {
-      "created": "2001-09-22",
-      "name": "DBA2J-ONH-1212",
-      "title": "Molecular clustering identifies complement and endothelin induction as early events in a mouse model of glaucoma."
-    },
-    [...]
-    {
-      "created": "2003-06-01",
-      "name": "Br_U_0603_M"
-    }
-  ],
-  "type": "resultItem"
-}
-```
-
-## GET /metadata/datasets/search/:term
-Search datasets based of it's title.
-
-*Parameters:* page(default=0), per-page(default=10)
-
-```
-curl "localhost:8080/api/metadata/datasets/search/BXD?page=2&limit=3"
-```
-
-Example Results:
-
-```
-{
-  "@context": {
-    "classifiedUnder": "xkos:classifiedUnder",
-    "currentPage": "ex:currentPage",
-    "data": "@graph",
-    "dataset": "rdfs:label",
-    "dct": "http://purl.org/dc/terms/",
-    "ex": "http://example.org/stuff/1.0/",
-    "id": "@id",
-    "inbredSet": "ex:belongsToInbredSet",
-    "pages": "ex:totalCount",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "result": "ex:result",
-    "resultItem": "ex:resultType",
-    "results": "ex:items",
-    "title": "dct:title",
-    "type": "@type",
-    "xkos": "http://rdf-vocabulary.ddialliance.org/xkos#"
-  },
-  "data": [
-    {
-      "currentPage": 2,
-      "id": "ex:result",
-      "pages": 46,
-      "results": [
-        {
-          "classifiedUnder": "Phenotype",
-          "dataset": "BXD-AEPublish",
-          "inbredSet": "BXD Adult and Aged Eye",
-          "title": "BXD Adult and Aged Eye Phenotypes"
-        },
-        {
-          "classifiedUnder": "Phenotype",
-          "dataset": "BXD-AEPublish",
-          "inbredSet": "BXD Adult and Aged Eye",
-          "title": "BXD Adult and Aged Eye Phenotypes"
-        },
-        {
-          "classifiedUnder": "Phenotype",
-          "dataset": "BXD-BonePublish",
-          "inbredSet": "BXD Bone Individual Data",
-          "title": "BXD Bone Individual Data"
-        }
-      ],
-      "type": "resultItem"
-    }
-  ]
-}
-```
-
-## GET /metadata/datasets/search/:term
-Search datasets based of it's title.
-
-*Parameters:* page(default=0), per-page(default=10)
-
-```
-curl "localhost:8080/api/metadata/datasets/search/BXD?page=2&limit=3"
-```
-
-## GET /metadata/publication/:name
-
-Get a publication given it's name.  Name can be a pubmedId or a GN-specific identifier for unpublished work.
-
-```
-curl localhost:8080/api/metadata/publications/2760876
-```
-
-Example Result:
-
-```
-{
-  "@context": {
-    "abstract": "dct:abstract",
-    "creator": "dct:creator",
-    "dct": "http://purl.org/dc/terms/",
-    "fabio": "http://purl.org/spar/fabio/",
-    "id": "@id",
-    "journal": "fabio:Journal",
-    "month": {
-      "@id": "prism:publicationDate",
-      "@type": "xsd:gMonth"
-    },
-    "page": "fabio:page",
-    "prism": "http://prismstandard.org/namespaces/basic/2.0/",
-    "title": "dct:title",
-    "type": "@type",
-    "volume": "prism:volume",
-    "xsd": "http://www.w3.org/2001/XMLSchema#",
-    "year": {
-      "@id": "fabio:hasPublicationYear",
-      "@type": "xsd:gYear"
-    }
-  },
-  "abstract": "Fetal gonadal size [...]",
-  "creator": [
-    "Argyropoulos G",
-    "Shire JG"
-  ],
-  "id": "http://rdf.ncbi.nlm.nih.gov/pubmed/2760876",
-  "journal": "J Reprod Fertil",
-  "month": "July",
-  "page": "473-478",
-  "title": "Genotypic effects on gonadal size in fetal mice",
-  "type": "fabio:ResearchPaper",
-  "volume": "86(2)",
-  "year": "1989"
-}
-```
-
-## GET /metadata/publications/search/:term
-
-Search publications using :term.
-
-```
-curl "localhost:8080/api/metadata/publications/search/BXD?page=0&limit=3"
-```
-
-
-Example Results:
-
-```
-{
-  "@context": {
-    "currentPage": "ex:currentPage",
-    "data": "@graph",
-    "dcat": "http://www.w3.org/ns/dcat#",
-    "dct": "http://purl.org/dc/terms/",
-    "ex": "http://example.org/stuff/1.0/",
-    "fabio": "http://purl.org/spar/fabio/",
-    "foaf": "http://xmlns.com/foaf/0.1/",
-    "generif": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=",
-    "genotype": "http://genenetwork.org/genotype/",
-    "gn": "http://genenetwork.org/id/",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "owl": "http://www.w3.org/2002/07/owl#",
-    "pages": "ex:totalCount",
-    "phenotype": "http://genenetwork.org/phenotype/",
-    "prism": "http://prismstandard.org/namespaces/basic/2.0/",
-    "publication": "http://genenetwork.org/publication/",
-    "pubmed": "fabio:hasPubMedId",
-    "rdf": "http://www.w3.org/1999/02/22-rdf-syntax-ns#",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "result": "ex:result",
-    "resultItem": "ex:resultType",
-    "results": "ex:items",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "taxon": "https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=",
-    "title": "dct:title",
-    "type": "@type",
-    "up": "http://purl.uniprot.org/core/",
-    "url": "rdfs:label",
-    "xkos": "http://rdf-vocabulary.ddialliance.org/xkos#",
-    "xsd": "http://www.w3.org/2001/XMLSchema#"
-  },
-  "data": [
-    {
-      "currentPage": 0,
-      "id": "ex:result",
-      "pages": 2740,
-      "results": [
-        {
-          "title": "A QTL on chromosome 1 modulates inter-male aggression in mice",
-          "url": "http://genenetwork.org/id/unpublished14159"
-        },
-        {
-          "title": "\tSystems genetics of metabolism: the use of the BXD murine reference panel for multiscalar integration of traits",
-          "url": "http://genenetwork.org/id/unpublished14051"
-        },
-        {
-          "title": "3a,5a-THP in BXD CIE study",
-          "url": "http://genenetwork.org/id/unpublished12780"
-        }
-      ],
-      "type": "resultItem"
-    }
-  ]
-}
-```
-
-## GET /metadata/phenotypes/:name
-Fetch metadata about a given phenotype given it's name.
-
-```
-curl "localhost:8080/api/metadata/phenotypes/BXD_10007"
-```
-
-Example Result:
-
-```
-{
-  "@context": {
-    "LRS": "gnt:LRS",
-    "abbreviation": "dct:abbreviation",
-    "abstract": "dct:abstract",
-    "additive": "gnt:additive",
-    "altName": "rdfs:altLabel",
-    "contributor": "dct:contributor",
-    "creator": "dct:creator",
-    "data": "@graph",
-    "dct": "http://purl.org/dc/terms/",
-    "description": "dct:description",
-    "fabio": "http://purl.org/spar/fabio/",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "journal": "fabio:Journal",
-    "labCode": "gnt:labCode",
-    "locus": "gnt:locus",
-    "mean": "gnt:mean",
-    "month": {
-      "@id": "prism:publicationDate",
-      "@type": "xsd:gMonth"
-    },
-    "page": "fabio:page",
-    "prism": "http://prismstandard.org/namespaces/basic/2.0/",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "references": "dct:isReferencedBy",
-    "sequence": "gnt:sequence",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "submitter": "gnt:submitter",
-    "title": "dct:title",
-    "trait": "rdfs:label",
-    "traitName": "skos:altLabel",
-    "type": "@type",
-    "volume": "prism:volume",
-    "xsd": "http://www.w3.org/2001/XMLSchema#",
-    "year": {
-      "@id": "fabio:hasPublicationYear",
-      "@type": "xsd:gYear"
-    }
-  },
-  "LRS": 14.3203,
-  "abstract": "To discover [...]",
-  "additive": 1.24101,
-  "creator": [
-    "Airey DC",
-    "Williams RW",
-    "Lu L"
-  ],
-  "description": "Central nervous system, morphology: Internal granule layer IGL of the cerebellum volume, adjusted for sex, age, body and brain weight [mm3]",
-  "gnt:abbreviation": "AdjIGLVol",
-  "http://example.org/stuff/1.0/inbredSet": "BXD Family",
-  "http://example.org/stuff/1.0/species": "Mouse (Mus musculus, mm10)",
-  "id": "http://genenetwork.org/id/traitBxd_10007",
-  "journal": "J Neurosci",
-  "locus": "rsm10000005700",
-  "mean": 18.2129,
-  "month": "Jul",
-  "page": "5099-5109",
-  "references": {
-    "id": "http://rdf.ncbi.nlm.nih.gov/pubmed/11438585"
-  },
-  "sequence": 1,
-  "submitter": "robwilliams",
-  "title": "Genetic control of the mouse cerebellum: identification of quantitative trait loci modulating size and architecture",
-
-  "trait": "10007",
-  "traitName": "BXD_10007",
-  "type": "gnc:Phenotype",
-  "volume": "21(14)",
-  "year": "2001"
-}
-```
-
-## GET /metadata/phenotypes/:group/:name
-Fetch metadata about a given phenotype given it's group and name.
-
-```
-curl "localhost:8080/api/metadata/phenotypes/BXD/10007"
-```
-
-Example Result:
-
-```
-{
-  "@context": {
-    "LRS": "gnt:LRS",
-    "abbreviation": "dct:abbreviation",
-    "abstract": "dct:abstract",
-    "additive": "gnt:additive",
-    "altName": "rdfs:altLabel",
-    "contributor": "dct:contributor",
-    "creator": "dct:creator",
-    "data": "@graph",
-    "dct": "http://purl.org/dc/terms/",
-    "description": "dct:description",
-    "fabio": "http://purl.org/spar/fabio/",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "journal": "fabio:Journal",
-    "labCode": "gnt:labCode",
-    "locus": "gnt:locus",
-    "mean": "gnt:mean",
-    "month": {
-      "@id": "prism:publicationDate",
-      "@type": "xsd:gMonth"
-    },
-    "page": "fabio:page",
-    "prism": "http://prismstandard.org/namespaces/basic/2.0/",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "references": "dct:isReferencedBy",
-    "sequence": "gnt:sequence",
-    "skos": "http://www.w3.org/2004/02/skos/core#",
-    "submitter": "gnt:submitter",
-    "title": "dct:title",
-    "trait": "rdfs:label",
-    "traitName": "skos:altLabel",
-    "type": "@type",
-    "volume": "prism:volume",
-    "xsd": "http://www.w3.org/2001/XMLSchema#",
-    "year": {
-      "@id": "fabio:hasPublicationYear",
-      "@type": "xsd:gYear"
-    }
-  },
-  "LRS": 14.3203,
-  "abstract": "To discover [...]",
-  "additive": 1.24101,
-  "creator": [
-    "Airey DC",
-    "Williams RW",
-    "Lu L"
-  ],
-  "description": "Central nervous system, morphology: Internal granule layer IGL of the cerebellum volume, adjusted for sex, age, body and brain weight [mm3]",
-  "gnt:abbreviation": "AdjIGLVol",
-  "http://example.org/stuff/1.0/inbredSet": "BXD Family",
-  "http://example.org/stuff/1.0/species": "Mouse (Mus musculus, mm10)",
-  "id": "http://genenetwork.org/id/traitBxd_10007",
-  "journal": "J Neurosci",
-  "locus": "rsm10000005700",
-  "mean": 18.2129,
-  "month": "Jul",
-  "page": "5099-5109",
-  "references": {
-    "id": "http://rdf.ncbi.nlm.nih.gov/pubmed/11438585"
-  },
-  "sequence": 1,
-  "submitter": "robwilliams",
-  "title": "Genetic control of the mouse cerebellum: identification of quantitative trait loci modulating size and architecture",
-  "trait": "10007",
-  "traitName": "BXD_10007",
-  "type": "gnc:Phenotype",
-  "volume": "21(14)",
-  "year": "2001"
-}
-```
-
-## GET /metadata/genotypes/:name
-Fetch metadata about a given genotype given it's name.
-
-```
-curl "localhost:8080/api/metadata/genotypes/D1Mit3"
-```
-
-Example Result
-
-```
-{
-  "@context": {
-    "alternateSource": "gnt:hasAltSourceName",
-    "chr": "gnt:chr",
-    "chrNum": {
-      "@id": "gnt:chrNum",
-      "@type": "xsd:int"
-    },
-    "comments": "rdfs:comments",
-    "data": "@graph",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "mb": "gnt:mb",
-    "mb2016": "gnt:mb2016",
-    "mbMm8": "gnt:mbMm8",
-    "name": "rdfs:label",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "sequence": "gnt:hasSequence",
-    "source": "gnt:hasSource",
-    "species": "xkos:classifiedUnder",
-    "type": "@type",
-    "xkos": "http://rdf-vocabulary.ddialliance.org/xkos#",
-    "xsd": "http://www.w3.org/2001/XMLSchema#"
-  },
-  "chr": "1",
-  "chrNum": "1",
-  "id": "http://genenetwork.org/id/D1mit3",
-  "mb": 19.812,
-  "mb2016": 19.8021,
-  "mbMm8": 19.7972,
-  "name": "D1Mit3",
-  "sequence": "TTTAGCAATGGGTANCGGGGATCTTCCACTGTCTTTGTGTCTTAGGACCCAGAATTTACTTTTCTTTTTGTTTTCTTTTCTTTTCCCTGTCTTTTTTTTTTTTTGCTTCTTTTATTTTAAAAATCTATTCATGTTTAAAGTCTCCCTCTCTGTCTCTCTGTCTGTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCAGTACATGTGGAAACCAGAAGAGGGCATCAGATTCCTAGGAACTGGAGCTACAGAT",
-  "source": "Mit",
-  "species": {
-    "id": "http://genenetwork.org/id/Mus_musculus",
-    "name": "Mus musculus"
-  },
-  "type": "gnc:Genotype"
-}
-```
-
-## GET /genewiki/gn/:symbol
-Get genewiki entries from Genetwork about a given symbol
-
-*Parameters:* page(default=0), per-page(default=10)
-
-```
-curl "localhost:8080/api/metadata/genewikis/gn/Lpl"
-```
-
-Example Result
-
-```
-{
-  "@context": {
-    "author": "dct:creator",
-    "category": "gnt:belongsToCategory",
-    "comment": "rdfs:comment",
-    "created": {
-      "@id": "dct:created",
-      "@type": "xsd:datetime"
-    },
-    "currentPage": "ex:currentPage",
-    "data": "@graph",
-    "dct": "http://purl.org/dc/terms/",
-    "entries": "ex:entries",
-    "ex": "http://example.org/stuff/1.0/",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "pages": "ex:totalCount",
-    "pubmed": "dct:references",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "type": "@type",
-    "xsd": "http://www.w3.org/2001/XMLSchema#"
-  },
-  "currentPage": 0,
-  "entries": [
-    {
-      "category": "Genetic variation and alleles",
-      "comment": "Individual probe analysis:probably true cisQTL",
-      "created": "2007-10-05T09:09:52",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    },
-    {
-      "category": "Expression patterns: mature cells, tissues; Gene structure and organization; Genetic variation and alleles",
-      "comment": "cis QTL present in hippocampus LXS, ILM2970706 distal 3' UTR, 121.4 LRS, ISS increases the trait;",
-      "created": "2007-05-10T05:52:22",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    },
-    {
-      "category": "",
-      "comment": "hippocampal CA1-3 expression signature",
-      "created": "2005-12-16T15:23:23",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": "http://rdf.ncbi.nlm.nih.gov/pubmed/15084669"
-    },
-    {
-      "category": "Probes and probe sets; Transcriptional and translation control",
-      "comment": "Validated strong cis-QTL in CNS using allele-specific expression ASE SNaPshot assay Daniel Ciobanu and al., 2007. Possible 3' UTR variants.",
-      "created": "2007-05-08T09:46:07",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    },
-    {
-      "author": "Robert Williams",
-      "category": "Genetic variation and alleles",
-      "comment": "cis eQTL in BXD brain RNA-seq data with LRS of 33 and high D allele. No obvious trans target transcripts.",
-      "created": "2012-11-10T07:30:09",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    },
-    {
-      "category": "Health and disease associations",
-      "comment": "Merck, Rosetta, Schadt, Lusis target gene associated with obesity, diabetes and atherosclerosis.",
-      "created": "2008-05-13T08:48:50",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    },
-    {
-      "author": "Robert Williams",
-      "category": "",
-      "comment": "Of interest to Lu Lu and colleagues 2015 due to modulation of expression of this gene in hippocampus following stress or ethanol BXD Illumina Hippocampus data sets.",
-      "created": "2015-05-26T11:37:57",
-      "ex:species": "Mouse (Mus musculus, mm10)",
-      "pubmed": ""
-    }
-  ],
-  "id": "http://genenetwork.org/id/symbolLpl",
-  "pages": 1,
-  "type": "gnc:GNWikiEntry"
-}
-```
-
-## GET /genewiki/ncbi/:symol
-Get genewiki entries from NCBI about a given symbol
-
-*Parameters:* page(default=0), per-page(default=10)
-
-```
-curl "localhost:8080/api/metadata/genewikis/ncbi/Lpl"
-```
-
-Example Result
-
-```
-{
-  "@context": {
-    "author": "dct:creator",
-    "category": "gnt:belongsToCategory",
-    "comment": "rdfs:comment",
-    "created": {
-      "@id": "dct:created",
-      "@type": "xsd:datetime"
-    },
-    "currentPage": "ex:currentPage",
-    "data": "@graph",
-    "dct": "http://purl.org/dc/terms/",
-    "entries": "ex:entries",
-    "ex": "http://example.org/stuff/1.0/",
-    "gnc": "http://genenetwork.org/category/",
-    "gnt": "http://genenetwork.org/term/",
-    "id": "@id",
-    "pages": "ex:totalCount",
-    "pubmed": "dct:references",
-    "rdfs": "http://www.w3.org/2000/01/rdf-schema#",
-    "type": "@type",
-    "xsd": "http://www.w3.org/2001/XMLSchema#"
-  },
-  "data": [
-    {
-      "currentPage": 0,
-      "entries": [
-        {
-          "comment": "Results support the use of LPL and ADAM29 gene expression associated to IGHV mutational status for predicting the clinical outcome of patients treated by oral fludarabine + cyclophosphamide and could be considered for treatment strategies.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "Observational study of gene-disease association and pharmacogenomic / toxicogenomic. HuGE Navigator",
-          "created": "2009-02-11T15:30:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "analysis of human placental lipoprotein lipase gestational and hormonal regulation",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "LPL 44X alleles were associated with moderately increased LDL peak particle size.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "LPL gene variant is involved in carotid atherosclerotic lesions.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "Metformin may increase LPL production, thereby increasing low density lipoprotein particle size which may be independent of the hypoglycemic effect of metforminin type 2 diabetes.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "LPL may represent a link between low adiponectin levels and dyslipidemia in both nondiabetic individuals and patients with type 2 diabetes.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "The PvuII polymorphism cannot be used as independent genetic risk factor for coronary artery disease in patients of Saudi Arabic descent.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Human (Homo sapiens, hg19)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=4023"
-          },
-          "pubmed": ""
-        }
-      ],
-      "id": "http://genenetwork.org/id/symbolLPL",
-      "pages": 48,
-      "type": "gnc:GNWikiEntry"
-    },
-    {
-      "currentPage": 0,
-      "entries": [
-        {
-          "comment": "LPL activity can be inhibited by endogenous apoC-I in apoE-knockout mice.",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Mouse (Mus musculus, mm10)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=16956"
-          },
-          "pubmed": ""
-        },
-        {
-          "comment": "STZ-induced diabetes causes a decrease in LPL activity in the sciatic nerve that is reversible with insulin treatment",
-          "created": "2010-01-20T18:00:00",
-          "ex:species": "Rat (Rattus norvegicus, rn7.2)",
-          "gnt:hasGeneId": {
-            "id": "http://www.ncbi.nlm.nih.gov/gene?cmd=Retrieve&dopt=Graphics&list_uids=24539"
-          },
-          "pubmed": ""
-        }
-      ],
-      "id": "http://genenetwork.org/id/symbolLpl",
-      "pages": 48,
-      "type": "gnc:GNWikiEntry"
-    }
-  ]
-}
-```