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"""
Create linked mrna data table
"""
from yoyo import step
__depends__ = {'20230404_02_la33P-create-genotype-resources-table'}
steps = [
step(
"""
CREATE TABLE IF NOT EXISTS linked_mrna_data
-- Link mRNA Assay data in MariaDB to user groups in auth system
(
data_link_id TEXT NOT NULL PRIMARY KEY, -- A new ID for the auth system
group_id TEXT NOT NULL, -- The user group the data is linked to
SpeciesId TEXT NOT NULL, -- The species in MariaDB
InbredSetId TEXT NOT NULL, -- The traits group in MariaDB
ProbeFreezeId TEXT NOT NULL, -- The study ID in MariaDB
ProbeSetFreezeId TEXT NOT NULL, -- The dataset Id in MariaDB
dataset_name TEXT, -- dataset Name in MariaDB
dataset_fullname, -- dataset FullName in MariaDB
dataset_shortname, -- dataset ShortName in MariaDB
FOREIGN KEY (group_id)
REFERENCES groups(group_id) ON UPDATE CASCADE ON DELETE RESTRICT
UNIQUE (SpeciesId, InbredSetId, ProbeFreezeId, ProbeSetFreezeId)
) WITHOUT ROWID
""",
"DROP TABLE IF EXISTS linked_mrna_data")
]
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