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4 daysFix some linting issues.Frederick Muriuki Muriithi
4 daysBugfix: Build up "WHERE" clauses correctlyFrederick Muriuki Muriithi
Have the email and name checked with "OR" where both are present.
4 daysProvide missing symbol.Frederick Muriuki Muriithi
4 daysBugfix: Set the correct value.Frederick Muriuki Muriithi
12 daysDelete system users.Frederick Muriuki Muriithi
13 daysSearch in names too. Fix query params.Frederick Muriuki Muriithi
13 daysEnable filtering of data, and limiting length.Frederick Muriuki Muriithi
2025-06-11Fix failing tests: add new privilege to group-leader.Frederick Muriuki Muriithi
2025-06-11Fix code issue caught by type-checker.Frederick Muriuki Muriithi
2025-06-11Fix code issues caught by the linter.Frederick Muriuki Muriithi
2025-06-09Add inbredset-group resource type in unlinked_data functionzsloan
This still needs to be implemented, but this commit prevents the key error
2025-06-09Add migrations for admin UI and batch edit privileges/roleszsloan
2025-06-09Enable linking multiple data items to a resource in single request.Frederick Muriuki Muriithi
2025-06-09Link 'group:data:link-to-group' privilege to the group-leader role.Frederick Muriuki Muriithi
2025-06-09Add a new privilege: 'group:data:link-to-group'Frederick Muriuki Muriithi
2025-06-09Use more flexible check for authorisation.Frederick Muriuki Muriithi
Use the more flexible check for authorisation that a user has on a specific resource.
2025-06-09Add function to fetch the wrapper resource for a specific group.Frederick Muriuki Muriithi
2025-06-09Add a function to fetch the system resource.Frederick Muriuki Muriithi
2025-06-09Check for a user's privileges on a particular resource.Frederick Muriuki Muriithi
Add a general function to check that a particular user has certain privileges on a particular resource.
2025-06-09Allow linking of data by passing the raw ids too.Frederick Muriuki Muriithi
2025-05-06Fix failing mypy.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-05-05Fix "C0301: Line too long" pylint error.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-03-31Update command in documentationFrederick Muriuki Muriithi
Use a command that will work in environments other than the author's environment.
2025-03-28Handle error raised in the case the request is not JSONFrederick Muriuki Muriithi
2025-03-28Add link to register account to sign-in pagezsloan
2025-03-28Simplify line where it was unnecessarily checking request.json twicezsloan
2025-03-14Add missing fix: Make display of minutes more human-friendly.Frederick Muriuki Muriithi
2025-03-14Make display of number of minutes more human-friendly.Frederick Muriuki Muriithi
2025-03-14Move expiry of auth-based emails into a config variable.Frederick Muriuki Muriithi
To ease setting up of value without changing code, move the value out into a configuration variable.
2025-02-28Remove dead comment.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-02-26Fix pylint errors.Frederick Muriuki Muriithi
2025-02-26Remove use of obsolete flask_helpers module.Frederick Muriuki Muriithi
Create the requests in the class, as appropriate, checking for content-type.
2025-02-26Temporarily comment out xapian-bindings as a dependency.Frederick Muriuki Muriithi
2025-02-26Use minimum versioning for dependencies rather than fixedFrederick Muriuki Muriithi
Change == to >= to specify the minimum version but allow newer ones too.
2025-02-26Make list of dependencies an actual list — add missing commas.Frederick Muriuki Muriithi
2025-02-17Use default sys-admin group if user is not a member of any group.Frederick Muriuki Muriithi
Instead of failing, assign any population resource to the default system admin group, if the user is not a member of any group.
2025-02-17Provide a way to fetch a system-administrator's group.Frederick Muriuki Muriithi
2025-02-03Left-align the labels.genenetwork-system-v1.0.0Frederick Muriuki Muriithi
2025-02-03Remove pagetitle values.Frederick Muriuki Muriithi
2025-02-03Improve layout and styling for the login page.Frederick Muriuki Muriithi
2025-02-03Improve page copy for the authorisation server.Frederick Muriuki Muriithi
2025-01-13Test post-commit receive hook.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-13Test post-receive hook.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2025-01-10Update server to support non-expiring JWTs.Frederick Muriuki Muriithi
2025-01-10Override `generate` to generate tokens without expiry.Frederick Muriuki Muriithi
2025-01-10Rework `get_token_data()` to only set 'exp' if its provided.Frederick Muriuki Muriithi
2025-01-10Allow for non-expiring JWT tokens.Frederick Muriuki Muriithi
2024-12-31Log out exceptions with the application's loggerFrederick Muriuki Muriithi
2024-12-31Allow the request to redirect from HTTP to HTTPS where relevant.Frederick Muriuki Muriithi
2024-12-31DEBUG: See the Public JWKS uri.Frederick Muriuki Muriithi