diff options
Diffstat (limited to 'gn_auth/auth')
| -rw-r--r-- | gn_auth/auth/authorisation/resources/checks.py | 2 | ||||
| -rw-r--r-- | gn_auth/auth/authorisation/resources/groups/models.py | 10 | ||||
| -rw-r--r-- | gn_auth/auth/authorisation/resources/groups/views.py | 5 |
3 files changed, 9 insertions, 8 deletions
diff --git a/gn_auth/auth/authorisation/resources/checks.py b/gn_auth/auth/authorisation/resources/checks.py index ca45a20..5484dbf 100644 --- a/gn_auth/auth/authorisation/resources/checks.py +++ b/gn_auth/auth/authorisation/resources/checks.py @@ -71,7 +71,7 @@ def authorised_for2( "INNER JOIN role_privileges ON roles.role_id=role_privileges.role_id " "INNER JOIN privileges " "ON role_privileges.privilege_id=privileges.privilege_id " - f"WHERE resources.resource_id=? " + "WHERE resources.resource_id=? " "AND user_roles.user_id=?") cursor.execute( _query, diff --git a/gn_auth/auth/authorisation/resources/groups/models.py b/gn_auth/auth/authorisation/resources/groups/models.py index 29dcc89..2df5f04 100644 --- a/gn_auth/auth/authorisation/resources/groups/models.py +++ b/gn_auth/auth/authorisation/resources/groups/models.py @@ -122,7 +122,7 @@ def create_group( cursor, group_name, ( {"group_description": group_description} if group_description else {})) - group_resource = { + _group_resource = { "group_id": str(new_group.group_id), "resource_id": str(uuid4()), "resource_name": group_name, @@ -135,17 +135,17 @@ def create_group( cursor.execute( "INSERT INTO resources VALUES " "(:resource_id, :resource_name, :resource_category_id, :public)", - group_resource) + _group_resource) cursor.execute( "INSERT INTO group_resources(resource_id, group_id) " "VALUES(:resource_id, :group_id)", - group_resource) + _group_resource) add_user_to_group(cursor, new_group, group_leader) revoke_user_role_by_name(cursor, group_leader, "group-creator") assign_user_role_by_name( cursor, group_leader, - UUID(str(group_resource["resource_id"])), + UUID(str(_group_resource["resource_id"])), "group-leader") return new_group @@ -523,7 +523,7 @@ def admin_group(conn: db.DbConnection) -> Either: cursor.fetchone()) -def group_resource(conn: db.DbConnection, group_id: UUID) -> Group: +def group_resource(conn: db.DbConnection, group_id: UUID) -> Resource: """Retrieve the system resource.""" with db.cursor(conn) as cursor: cursor.execute( diff --git a/gn_auth/auth/authorisation/resources/groups/views.py b/gn_auth/auth/authorisation/resources/groups/views.py index 368284f..746e23c 100644 --- a/gn_auth/auth/authorisation/resources/groups/views.py +++ b/gn_auth/auth/authorisation/resources/groups/views.py @@ -235,7 +235,7 @@ def unlinked_data(resource_type: str) -> Response: if resource_type in ("system", "group"): return jsonify(tuple()) - if resource_type not in ("all", "mrna", "genotype", "phenotype"): + if resource_type not in ("all", "mrna", "genotype", "phenotype", "inbredset-group"): raise AuthorisationError(f"Invalid resource type {resource_type}") with require_oauth.acquire("profile group resource") as the_token: @@ -253,7 +253,8 @@ def unlinked_data(resource_type: str) -> Response: "genotype": unlinked_genotype_data, "phenotype": lambda conn, grp: partial( unlinked_phenotype_data, gn3conn=gn3conn)( - authconn=conn, group=grp) + authconn=conn, group=grp), + "inbredset-group": lambda authconn, ugroup: [] # Still need to implement this } return jsonify(tuple( dict(row) for row in unlinked_fns[resource_type]( |