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-rw-r--r--gn_auth/auth/authorisation/resources/inbredset/views.py82
1 files changed, 79 insertions, 3 deletions
diff --git a/gn_auth/auth/authorisation/resources/inbredset/views.py b/gn_auth/auth/authorisation/resources/inbredset/views.py
index 444c442..b559105 100644
--- a/gn_auth/auth/authorisation/resources/inbredset/views.py
+++ b/gn_auth/auth/authorisation/resources/inbredset/views.py
@@ -1,12 +1,22 @@
"""Views for InbredSet resources."""
-from flask import jsonify, Response, Blueprint
+from pymonad.either import Left, Right, Either
+from flask import jsonify, Response, Blueprint, current_app as app
+
from gn_auth.auth.db import sqlite3 as db
+from gn_auth.auth.requests import request_json
from gn_auth.auth.db.sqlite3 import with_db_connection
+from gn_auth.auth.authentication.oauth2.resource_server import require_oauth
+from gn_auth.auth.authorisation.resources.groups.models import user_group
+
+from .models import (create_resource,
+ link_data_to_resource,
+ assign_inbredset_group_owner_role)
-iset = Blueprint("inbredset", __name__)
+popbp = Blueprint("populations", __name__)
-@iset.route("/resource-id/<int:speciesid>/<int:inbredsetid>")
+@popbp.route("/populations/resource-id/<int:speciesid>/<int:inbredsetid>",
+ methods=["GET"])
def resource_id_by_inbredset_id(speciesid: int, inbredsetid: int) -> Response:
"""Retrieve the resource ID for resource attached to the inbredset."""
def __res_by_iset_id__(conn):
@@ -34,3 +44,69 @@ def resource_id_by_inbredset_id(speciesid: int, inbredsetid: int) -> Response:
resp.status_code = 404
return resp
+
+
+@popbp.route("/populations/create", methods=["POST"])
+@require_oauth("profile group resource")
+def create_population_resource():
+ """Create a resource of type 'inbredset-group'."""
+ with (require_oauth.acquire("profile group resource") as _token,
+ db.connection(app.config["AUTH_DB"]) as conn,
+ db.cursor(conn) as cursor):
+
+ def __check_form__(form, usergroup) -> Either:
+ """Check form for errors."""
+ errors: tuple[str, ...] = tuple()
+
+ species_id = form.get("species_id")
+ if not bool(species_id):
+ errors = errors + ("Missing `species_id` value.",)
+
+ population_id = form.get("population_id")
+ if not bool(population_id):
+ errors = errors + ("Missing `population_id` value.",)
+
+ population_name = form.get("population_name")
+ if not bool(population_name):
+ errors = errors + ("Missing `population_name` value.",)
+
+ population_fullname = form.get("population_fullname")
+ if not bool(population_fullname):
+ errors = errors + ("Missing `population_fullname` value.",)
+
+ if bool(errors):
+ error_messages = "\n\t - ".join(errors)
+ return Left({
+ "error": "Invalid Request Data!",
+ "error_description": error_messages
+ })
+
+ return Right({"formdata": form, "group": usergroup})
+
+ return user_group(conn, _token.user).then(
+ lambda group: __check_form__(request_json(), group)
+ ).then(
+ lambda formdata: {
+ **formdata,
+ "resource": create_resource(
+ cursor,
+ f"Population — {formdata['formdata']['population_name']}",
+ _token.user,
+ formdata["group"],
+ formdata["formdata"].get("public", "on") == "on")}
+ ).then(
+ lambda resource: {
+ **resource,
+ "resource": assign_inbredset_group_owner_role(
+ cursor, resource["resource"], _token.user)}
+ ).then(
+ lambda resource: link_data_to_resource(
+ cursor,
+ resource["resource"].resource_id,
+ resource["formdata"]["species_id"],
+ resource["formdata"]["population_id"],
+ resource["formdata"]["population_name"],
+ resource["formdata"]["population_fullname"])
+ ).either(
+ lambda error: (jsonify(error), 400),
+ jsonify)