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authorFrederick Muriuki Muriithi2024-11-22 10:02:40 -0600
committerFrederick Muriuki Muriithi2024-11-22 10:17:19 -0600
commit463194da3cfc077513e98948dd31cfd60d2eb0e0 (patch)
tree90716f2a8e7b64772871df24e28f6c5a788deca4 /gn_auth/auth/authorisation/resources/groups/views.py
parentcab78050064424d31534c3bba9c68080108dacd6 (diff)
downloadgn-auth-463194da3cfc077513e98948dd31cfd60d2eb0e0.tar.gz
Use code in gn_libs for MySQL/MariaDB connection.
Update the application to use the gn_libs code for connecting to the database, rather than using a local module.
Diffstat (limited to 'gn_auth/auth/authorisation/resources/groups/views.py')
-rw-r--r--gn_auth/auth/authorisation/resources/groups/views.py6
1 files changed, 3 insertions, 3 deletions
diff --git a/gn_auth/auth/authorisation/resources/groups/views.py b/gn_auth/auth/authorisation/resources/groups/views.py
index 920f504..368284f 100644
--- a/gn_auth/auth/authorisation/resources/groups/views.py
+++ b/gn_auth/auth/authorisation/resources/groups/views.py
@@ -9,10 +9,10 @@ from dataclasses import asdict
from MySQLdb.cursors import DictCursor
from flask import jsonify, Response, Blueprint, current_app
-from gn_auth.auth.requests import request_json
+from gn_libs import mysqldb as gn3db
+from gn_auth.auth.requests import request_json
from gn_auth.auth.db import sqlite3 as db
-from gn_auth.auth.db import mariadb as gn3db
from gn_auth.auth.db.sqlite3 import with_db_connection
from gn_auth.auth.authorisation.privileges import privileges_by_ids
@@ -169,7 +169,7 @@ def unlinked_genotype_data(
return tuple(dict(row) for row in cursor.fetchall())
def unlinked_phenotype_data(
- authconn: db.DbConnection, gn3conn: gn3db.DbConnection,
+ authconn: db.DbConnection, gn3conn: gn3db.Connection,
group: Group) -> tuple[dict, ...]:
"""
Retrieve all phenotype data linked to a group but not linked to any