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authorShelbySolomonDarnell2024-10-17 12:24:26 +0300
committerShelbySolomonDarnell2024-10-17 12:24:26 +0300
commit00cba4b9a1e88891f1f96a1199320092c1962343 (patch)
tree270fd06daa18b2fc5687ee72d912cad771354bb0 /gnqa/paper2_eval/data/dataset/human/intermediate_files/human_de_gn_32
parente0b2b0e55049b89805f73f291df1e28fa05487fe (diff)
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Docker image built to run code, all evals run using R2RHEADmaster
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+{
+ "titles": [
+ "2015 - Linking traits based on their shared molecular mechanisms.pdf",
+ "2015_GN_Diabets_notheses.pdf",
+ "2015 -Oren- Linking traits molecular mechanisms.pdf",
+ "2008 - Rutter_s child and adolescent psychiatry-Blackwell Pub (2008).pdf",
+ "2004 - Combining QTL and Microarray Data.pdf",
+ "2015 - Linking traits based on their shared molecular mechanisms.pdf",
+ "2015_GN_Diabets_notheses.pdf",
+ "2015 -Oren- Linking traits molecular mechanisms.pdf",
+ "2012 - Needs Analysis of Genetics and Genomics in Communication Sciences and Disorders.pdf",
+ "2007 - An Informatics Approach to Systems Neurogenetics.pdf"
+ ],
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+ "contexts": [
+ "3, 4 and 5 suggest previously unknown connections between traits. We next characterized pairs of traits within each group of traits (trait pairs) to show that the quality of these pairs is not lower than in existing methods. We focused on three main properties of trait pairs: the correlation among traits in a pair; the correlation between a trait pair and the",
+ "3, 4 and 5 suggest previously unknown connections between traits. We next characterized pairs of traits within each group of traits (trait pairs) to show that the quality of these pairs is not lower than in existing methods. We focused on three main properties of trait pairs: the correlation among traits in a pair; the correlation between a trait pair and the",
+ "3, 4 and 5 suggest previously unknown connections between traits. We next characterized pairs of traits within each group of traits (trait pairs) to show that the quality of these pairs is not lower than in existing methods. We focused on three main properties of trait pairs: the correlation among traits in a pair; the correlation between a trait pair and the",
+ "taxonomy of traits is that it allows researchers to turn theirattention to the ways temperament and personality traitsexpress themselves in daily life and to the fundamental pro-cesses underlying variations in these traits. In this section, we rst describe the traits and then review some of the mostinteresting current work on the psychological and evolutionaryunderpinnings of each trait. A more detailed description of thecomponents of these traits is found in Caspi and Shiner (2006).Because relatively less",
+ "ditions and related totraits ofinter est,often bycomparing two groups differing forthetrait. Darvasi (2003) states that thereisanundeclar eddispute among resear chers who study complex traits :::Onone side areclassical geneticists :::ontheother areproponents ofgene expr ession analysis :::.Darvasi goes ontooutline thepossible advantages ofcombining these techniques over and above either technique alone. Inaddition tobetter correlating ge-",
+ "three types of high-order organization of traits. (i) Groups of tightly related traits that share thesame transcripts mechanisms (modules 1, 2, 6, 7, 8, e.g., Figure 3 ). (ii) Groups of distinct traits that share the same transcripts mechanism, but not necessarily high correlations among them (modules 3, 4, 5, e.g., Figure 4 ). (iii) Different groups commonly have overlapping traits, but typically differ in their underlying mechanisms ( Figure 2B ).",
+ "three types of high-order organization of traits. (i) Groups of tightly related traits that share thesame transcripts mechanisms (modules 1, 2, 6, 7, 8, e.g., Figure 3 ). (ii) Groups of distinct traits that share the same transcripts mechanism, but not necessarily high correlations among them (modules 3, 4, 5, e.g., Figure 4 ). (iii) Different groups commonly have overlapping traits, but typically differ in their underlying mechanisms ( Figure 2B ).",
+ "three types of high-order organization of traits. (i) Groups of tightly related traits that share thesame transcripts mechanisms (modules 1, 2, 6, 7, 8, e.g., Figure 3 ). (ii) Groups of distinct traits that share the same transcripts mechanism, but not necessarily high correlations among them (modules 3, 4, 5, e.g., Figure 4 ). (iii) Different groups commonly have overlapping traits, but typically differ in their underlying mechanisms ( Figure 2B ).",
+ "of varying effect sizes (small to moderate), interact with each other across time to manifest as individual genotypic and phenotypic traits. These traits contribute to normal variation in human behavior. Yet, these trait variants also increase the susceptibility of a disorder or a condition for many others.",
+ "action will open a Correlation Plot page in which you can examine the relationship between the two traits. Look for linearity and outliers. 3.3.1. Selection and Saving Multiple Traits The list of traits on the Correlation Results page represents traits that may be related in some way. You may want to select a group of them for further analysis. For example, use the checkboxes to the left of each entry to check entries 1, 9, 10, 14, 16, 18, traits related to brain size. Click the Add to collection"
+ ],
+ "answer": "The different relationships between traits can be categorized into several types based on the provided context: 1. **Correlation Among Traits in a Pair**: This refers to how traits within a pair are related to each other in terms of their correlation [1], [2], [3]. 2. **Correlation Between a Trait Pair and Other Factors**: This involves examining how a pair of traits correlates with other external factors or conditions [1], [2], [3]. 3. **High-Order Organization of Traits**: - **Groups of Tightly Related Traits**: These are traits that share the same transcript mechanisms and are highly correlated with each other (modules 1, 2, 6, 7, 8) [6], [7], [8]. - **Groups of Distinct Traits with Shared Mechanisms**: These traits share the same transcript mechanisms but do not necessarily have high correlations among themselves (modules 3, 4, 5) [6], [7], [8]. - **Overlapping Traits in Different Groups**: Different groups of traits may have overlapping traits but typically differ in their underlying mechanisms [6], [7], [8]. These relationships highlight the complexity and interconnectedness of traits, showing that they can be related through direct correlations, shared mechanisms, or overlapping characteristics.",
+ "question": "What are the different relationship between traits?"
+} \ No newline at end of file