two version of R2R are here HEAD master

1 files changed, 211 insertions, 0 deletions

diff --git a/R2R/r2r/pipes/ingestion/parsing_pipe.py b/R2R/r2r/pipes/ingestion/parsing_pipe.py
new file mode 100755
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+++ b/R2R/r2r/pipes/ingestion/parsing_pipe.py
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+"""
+This module contains the `DocumentParsingPipe` class, which is responsible for parsing incoming documents into plaintext.
+"""
+
+import asyncio
+import logging
+import time
+import uuid
+from typing import AsyncGenerator, Optional, Union
+
+from r2r.base import (
+    AsyncParser,
+    AsyncState,
+    Document,
+    DocumentType,
+    Extraction,
+    ExtractionType,
+    KVLoggingSingleton,
+    PipeType,
+    generate_id_from_label,
+)
+from r2r.base.abstractions.exception import R2RDocumentProcessingError
+from r2r.base.pipes.base_pipe import AsyncPipe
+from r2r.parsers.media.audio_parser import AudioParser
+from r2r.parsers.media.docx_parser import DOCXParser
+from r2r.parsers.media.img_parser import ImageParser
+from r2r.parsers.media.movie_parser import MovieParser
+from r2r.parsers.media.pdf_parser import PDFParser
+from r2r.parsers.media.ppt_parser import PPTParser
+from r2r.parsers.structured.csv_parser import CSVParser
+from r2r.parsers.structured.json_parser import JSONParser
+from r2r.parsers.structured.xlsx_parser import XLSXParser
+from r2r.parsers.text.html_parser import HTMLParser
+from r2r.parsers.text.md_parser import MDParser
+from r2r.parsers.text.text_parser import TextParser
+
+logger = logging.getLogger(__name__)
+
+
+class ParsingPipe(AsyncPipe):
+    """
+    Processes incoming documents into plaintext based on their data type.
+    Supports TXT, JSON, HTML, and PDF formats.
+    """
+
+    class Input(AsyncPipe.Input):
+        message: AsyncGenerator[Document, None]
+
+    AVAILABLE_PARSERS = {
+        DocumentType.CSV: CSVParser,
+        DocumentType.DOCX: DOCXParser,
+        DocumentType.HTML: HTMLParser,
+        DocumentType.JSON: JSONParser,
+        DocumentType.MD: MDParser,
+        DocumentType.PDF: PDFParser,
+        DocumentType.PPTX: PPTParser,
+        DocumentType.TXT: TextParser,
+        DocumentType.XLSX: XLSXParser,
+        DocumentType.GIF: ImageParser,
+        DocumentType.JPEG: ImageParser,
+        DocumentType.JPG: ImageParser,
+        DocumentType.PNG: ImageParser,
+        DocumentType.SVG: ImageParser,
+        DocumentType.MP3: AudioParser,
+        DocumentType.MP4: MovieParser,
+    }
+
+    IMAGE_TYPES = {
+        DocumentType.GIF,
+        DocumentType.JPG,
+        DocumentType.JPEG,
+        DocumentType.PNG,
+        DocumentType.SVG,
+    }
+
+    def __init__(
+        self,
+        excluded_parsers: list[DocumentType],
+        override_parsers: Optional[dict[DocumentType, AsyncParser]] = None,
+        pipe_logger: Optional[KVLoggingSingleton] = None,
+        type: PipeType = PipeType.INGESTOR,
+        config: Optional[AsyncPipe.PipeConfig] = None,
+        *args,
+        **kwargs,
+    ):
+        super().__init__(
+            pipe_logger=pipe_logger,
+            type=type,
+            config=config
+            or AsyncPipe.PipeConfig(name="default_document_parsing_pipe"),
+            *args,
+            **kwargs,
+        )
+
+        self.parsers = {}
+
+        if not override_parsers:
+            override_parsers = {}
+
+        # Apply overrides if specified
+        for doc_type, parser in override_parsers.items():
+            self.parsers[doc_type] = parser
+
+        for doc_type, parser_info in self.AVAILABLE_PARSERS.items():
+            if (
+                doc_type not in excluded_parsers
+                and doc_type not in self.parsers
+            ):
+                self.parsers[doc_type] = parser_info()
+
+    @property
+    def supported_types(self) -> list[str]:
+        """
+        Lists the data types supported by the pipe.
+        """
+        return [entry_type for entry_type in DocumentType]
+
+    async def _parse(
+        self,
+        document: Document,
+        run_id: uuid.UUID,
+        version: str,
+    ) -> AsyncGenerator[Union[R2RDocumentProcessingError, Extraction], None]:
+        if document.type not in self.parsers:
+            yield R2RDocumentProcessingError(
+                document_id=document.id,
+                error_message=f"Parser for {document.type} not found in `ParsingPipe`.",
+            )
+            return
+        parser = self.parsers[document.type]
+        texts = parser.ingest(document.data)
+        extraction_type = ExtractionType.TXT
+        t0 = time.time()
+        if document.type in self.IMAGE_TYPES:
+            extraction_type = ExtractionType.IMG
+            document.metadata["image_type"] = document.type.value
+            # SAVE IMAGE DATA
+            # try:
+            #     import base64
+            #     sanitized_data = base64.b64encode(document.data).decode('utf-8')
+            # except Exception as e:
+            #     sanitized_data = document.data
+
+            # document.metadata["image_data"] = sanitized_data
+        elif document.type == DocumentType.MP4:
+            extraction_type = ExtractionType.MOV
+            document.metadata["audio_type"] = document.type.value
+
+        iteration = 0
+        async for text in texts:
+            extraction_id = generate_id_from_label(
+                f"{document.id}-{iteration}-{version}"
+            )
+            document.metadata["version"] = version
+            extraction = Extraction(
+                id=extraction_id,
+                data=text,
+                metadata=document.metadata,
+                document_id=document.id,
+                type=extraction_type,
+            )
+            yield extraction
+            # TODO - Add settings to enable extraction logging
+            # extraction_dict = extraction.dict()
+            # await self.enqueue_log(
+            #     run_id=run_id,
+            #     key="extraction",
+            #     value=json.dumps(
+            #         {
+            #             "data": extraction_dict["data"],
+            #             "document_id": str(extraction_dict["document_id"]),
+            #             "extraction_id": str(extraction_dict["id"]),
+            #         }
+            #     ),
+            # )
+            iteration += 1
+        logger.debug(
+            f"Parsed document with id={document.id}, title={document.metadata.get('title', None)}, user_id={document.metadata.get('user_id', None)}, metadata={document.metadata} into {iteration} extractions in t={time.time() - t0:.2f} seconds."
+        )
+
+    async def _run_logic(
+        self,
+        input: Input,
+        state: AsyncState,
+        run_id: uuid.UUID,
+        versions: Optional[list[str]] = None,
+        *args,
+        **kwargs,
+    ) -> AsyncGenerator[Extraction, None]:
+        parse_tasks = []
+
+        iteration = 0
+        async for document in input.message:
+            version = versions[iteration] if versions else "v0"
+            iteration += 1
+            parse_tasks.append(
+                self._handle_parse_task(document, version, run_id)
+            )
+
+        # Await all tasks and yield results concurrently
+        for parse_task in asyncio.as_completed(parse_tasks):
+            for extraction in await parse_task:
+                yield extraction
+
+    async def _handle_parse_task(
+        self, document: Document, version: str, run_id: uuid.UUID
+    ) -> AsyncGenerator[Extraction, None]:
+        extractions = []
+        async for extraction in self._parse(document, run_id, version):
+            extractions.append(extraction)
+        return extractions