two version of R2R are here HEAD master

1 files changed, 400 insertions, 0 deletions

diff --git a/.venv/lib/python3.12/site-packages/setuptools/command/build_py.py b/.venv/lib/python3.12/site-packages/setuptools/command/build_py.py
new file mode 100644
index 00000000..2f6fcb7c
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+++ b/.venv/lib/python3.12/site-packages/setuptools/command/build_py.py
@@ -0,0 +1,400 @@
+from __future__ import annotations
+
+import fnmatch
+import itertools
+import os
+import stat
+import textwrap
+from collections.abc import Iterable, Iterator
+from functools import partial
+from glob import glob
+from pathlib import Path
+
+from more_itertools import unique_everseen
+
+from .._path import StrPath, StrPathT
+from ..dist import Distribution
+from ..warnings import SetuptoolsDeprecationWarning
+
+import distutils.command.build_py as orig
+import distutils.errors
+from distutils.util import convert_path
+
+_IMPLICIT_DATA_FILES = ('*.pyi', 'py.typed')
+
+
+def make_writable(target) -> None:
+    os.chmod(target, os.stat(target).st_mode | stat.S_IWRITE)
+
+
+class build_py(orig.build_py):
+    """Enhanced 'build_py' command that includes data files with packages
+
+    The data files are specified via a 'package_data' argument to 'setup()'.
+    See 'setuptools.dist.Distribution' for more details.
+
+    Also, this version of the 'build_py' command allows you to specify both
+    'py_modules' and 'packages' in the same setup operation.
+    """
+
+    distribution: Distribution  # override distutils.dist.Distribution with setuptools.dist.Distribution
+    editable_mode: bool = False
+    existing_egg_info_dir: StrPath | None = None  #: Private API, internal use only.
+
+    def finalize_options(self):
+        orig.build_py.finalize_options(self)
+        self.package_data = self.distribution.package_data
+        self.exclude_package_data = self.distribution.exclude_package_data or {}
+        if 'data_files' in self.__dict__:
+            del self.__dict__['data_files']
+
+    def copy_file(  # type: ignore[override] # No overload, no bytes support
+        self,
+        infile: StrPath,
+        outfile: StrPathT,
+        preserve_mode: bool = True,
+        preserve_times: bool = True,
+        link: str | None = None,
+        level: object = 1,
+    ) -> tuple[StrPathT | str, bool]:
+        # Overwrite base class to allow using links
+        if link:
+            infile = str(Path(infile).resolve())
+            outfile = str(Path(outfile).resolve())  # type: ignore[assignment] # Re-assigning a str when outfile is StrPath is ok
+        return super().copy_file(  # pyright: ignore[reportReturnType] # pypa/distutils#309
+            infile, outfile, preserve_mode, preserve_times, link, level
+        )
+
+    def run(self) -> None:
+        """Build modules, packages, and copy data files to build directory"""
+        if not (self.py_modules or self.packages) or self.editable_mode:
+            return
+
+        if self.py_modules:
+            self.build_modules()
+
+        if self.packages:
+            self.build_packages()
+            self.build_package_data()
+
+        # Only compile actual .py files, using our base class' idea of what our
+        # output files are.
+        self.byte_compile(orig.build_py.get_outputs(self, include_bytecode=False))
+
+    def __getattr__(self, attr: str):
+        "lazily compute data files"
+        if attr == 'data_files':
+            self.data_files = self._get_data_files()
+            return self.data_files
+        return orig.build_py.__getattr__(self, attr)
+
+    def _get_data_files(self):
+        """Generate list of '(package,src_dir,build_dir,filenames)' tuples"""
+        self.analyze_manifest()
+        return list(map(self._get_pkg_data_files, self.packages or ()))
+
+    def get_data_files_without_manifest(self):
+        """
+        Generate list of ``(package,src_dir,build_dir,filenames)`` tuples,
+        but without triggering any attempt to analyze or build the manifest.
+        """
+        # Prevent eventual errors from unset `manifest_files`
+        # (that would otherwise be set by `analyze_manifest`)
+        self.__dict__.setdefault('manifest_files', {})
+        return list(map(self._get_pkg_data_files, self.packages or ()))
+
+    def _get_pkg_data_files(self, package):
+        # Locate package source directory
+        src_dir = self.get_package_dir(package)
+
+        # Compute package build directory
+        build_dir = os.path.join(*([self.build_lib] + package.split('.')))
+
+        # Strip directory from globbed filenames
+        filenames = [
+            os.path.relpath(file, src_dir)
+            for file in self.find_data_files(package, src_dir)
+        ]
+        return package, src_dir, build_dir, filenames
+
+    def find_data_files(self, package, src_dir):
+        """Return filenames for package's data files in 'src_dir'"""
+        patterns = self._get_platform_patterns(
+            self.package_data,
+            package,
+            src_dir,
+            extra_patterns=_IMPLICIT_DATA_FILES,
+        )
+        globs_expanded = map(partial(glob, recursive=True), patterns)
+        # flatten the expanded globs into an iterable of matches
+        globs_matches = itertools.chain.from_iterable(globs_expanded)
+        glob_files = filter(os.path.isfile, globs_matches)
+        files = itertools.chain(
+            self.manifest_files.get(package, []),
+            glob_files,
+        )
+        return self.exclude_data_files(package, src_dir, files)
+
+    def get_outputs(self, include_bytecode: bool = True) -> list[str]:  # type: ignore[override] # Using a real boolean instead of 0|1
+        """See :class:`setuptools.commands.build.SubCommand`"""
+        if self.editable_mode:
+            return list(self.get_output_mapping().keys())
+        return super().get_outputs(include_bytecode)
+
+    def get_output_mapping(self) -> dict[str, str]:
+        """See :class:`setuptools.commands.build.SubCommand`"""
+        mapping = itertools.chain(
+            self._get_package_data_output_mapping(),
+            self._get_module_mapping(),
+        )
+        return dict(sorted(mapping, key=lambda x: x[0]))
+
+    def _get_module_mapping(self) -> Iterator[tuple[str, str]]:
+        """Iterate over all modules producing (dest, src) pairs."""
+        for package, module, module_file in self.find_all_modules():
+            package = package.split('.')
+            filename = self.get_module_outfile(self.build_lib, package, module)
+            yield (filename, module_file)
+
+    def _get_package_data_output_mapping(self) -> Iterator[tuple[str, str]]:
+        """Iterate over package data producing (dest, src) pairs."""
+        for package, src_dir, build_dir, filenames in self.data_files:
+            for filename in filenames:
+                target = os.path.join(build_dir, filename)
+                srcfile = os.path.join(src_dir, filename)
+                yield (target, srcfile)
+
+    def build_package_data(self) -> None:
+        """Copy data files into build directory"""
+        for target, srcfile in self._get_package_data_output_mapping():
+            self.mkpath(os.path.dirname(target))
+            _outf, _copied = self.copy_file(srcfile, target)
+            make_writable(target)
+
+    def analyze_manifest(self) -> None:
+        self.manifest_files: dict[str, list[str]] = {}
+        if not self.distribution.include_package_data:
+            return
+        src_dirs: dict[str, str] = {}
+        for package in self.packages or ():
+            # Locate package source directory
+            src_dirs[assert_relative(self.get_package_dir(package))] = package
+
+        if (
+            self.existing_egg_info_dir
+            and Path(self.existing_egg_info_dir, "SOURCES.txt").exists()
+        ):
+            egg_info_dir = self.existing_egg_info_dir
+            manifest = Path(egg_info_dir, "SOURCES.txt")
+            files = manifest.read_text(encoding="utf-8").splitlines()
+        else:
+            self.run_command('egg_info')
+            ei_cmd = self.get_finalized_command('egg_info')
+            egg_info_dir = ei_cmd.egg_info
+            files = ei_cmd.filelist.files
+
+        check = _IncludePackageDataAbuse()
+        for path in self._filter_build_files(files, egg_info_dir):
+            d, f = os.path.split(assert_relative(path))
+            prev = None
+            oldf = f
+            while d and d != prev and d not in src_dirs:
+                prev = d
+                d, df = os.path.split(d)
+                f = os.path.join(df, f)
+            if d in src_dirs:
+                if f == oldf:
+                    if check.is_module(f):
+                        continue  # it's a module, not data
+                else:
+                    importable = check.importable_subpackage(src_dirs[d], f)
+                    if importable:
+                        check.warn(importable)
+                self.manifest_files.setdefault(src_dirs[d], []).append(path)
+
+    def _filter_build_files(
+        self, files: Iterable[str], egg_info: StrPath
+    ) -> Iterator[str]:
+        """
+        ``build_meta`` may try to create egg_info outside of the project directory,
+        and this can be problematic for certain plugins (reported in issue #3500).
+
+        Extensions might also include between their sources files created on the
+        ``build_lib`` and ``build_temp`` directories.
+
+        This function should filter this case of invalid files out.
+        """
+        build = self.get_finalized_command("build")
+        build_dirs = (egg_info, self.build_lib, build.build_temp, build.build_base)
+        norm_dirs = [os.path.normpath(p) for p in build_dirs if p]
+
+        for file in files:
+            norm_path = os.path.normpath(file)
+            if not os.path.isabs(file) or all(d not in norm_path for d in norm_dirs):
+                yield file
+
+    def get_data_files(self) -> None:
+        pass  # Lazily compute data files in _get_data_files() function.
+
+    def check_package(self, package, package_dir):
+        """Check namespace packages' __init__ for declare_namespace"""
+        try:
+            return self.packages_checked[package]
+        except KeyError:
+            pass
+
+        init_py = orig.build_py.check_package(self, package, package_dir)
+        self.packages_checked[package] = init_py
+
+        if not init_py or not self.distribution.namespace_packages:
+            return init_py
+
+        for pkg in self.distribution.namespace_packages:
+            if pkg == package or pkg.startswith(package + '.'):
+                break
+        else:
+            return init_py
+
+        with open(init_py, 'rb') as f:
+            contents = f.read()
+        if b'declare_namespace' not in contents:
+            raise distutils.errors.DistutilsError(
+                f"Namespace package problem: {package} is a namespace package, but "
+                "its\n__init__.py does not call declare_namespace()! Please "
+                'fix it.\n(See the setuptools manual under '
+                '"Namespace Packages" for details.)\n"'
+            )
+        return init_py
+
+    def initialize_options(self):
+        self.packages_checked = {}
+        orig.build_py.initialize_options(self)
+        self.editable_mode = False
+        self.existing_egg_info_dir = None
+
+    def get_package_dir(self, package):
+        res = orig.build_py.get_package_dir(self, package)
+        if self.distribution.src_root is not None:
+            return os.path.join(self.distribution.src_root, res)
+        return res
+
+    def exclude_data_files(self, package, src_dir, files):
+        """Filter filenames for package's data files in 'src_dir'"""
+        files = list(files)
+        patterns = self._get_platform_patterns(
+            self.exclude_package_data,
+            package,
+            src_dir,
+        )
+        match_groups = (fnmatch.filter(files, pattern) for pattern in patterns)
+        # flatten the groups of matches into an iterable of matches
+        matches = itertools.chain.from_iterable(match_groups)
+        bad = set(matches)
+        keepers = (fn for fn in files if fn not in bad)
+        # ditch dupes
+        return list(unique_everseen(keepers))
+
+    @staticmethod
+    def _get_platform_patterns(spec, package, src_dir, extra_patterns=()):
+        """
+        yield platform-specific path patterns (suitable for glob
+        or fn_match) from a glob-based spec (such as
+        self.package_data or self.exclude_package_data)
+        matching package in src_dir.
+        """
+        raw_patterns = itertools.chain(
+            extra_patterns,
+            spec.get('', []),
+            spec.get(package, []),
+        )
+        return (
+            # Each pattern has to be converted to a platform-specific path
+            os.path.join(src_dir, convert_path(pattern))
+            for pattern in raw_patterns
+        )
+
+
+def assert_relative(path):
+    if not os.path.isabs(path):
+        return path
+    from distutils.errors import DistutilsSetupError
+
+    msg = (
+        textwrap.dedent(
+            """
+        Error: setup script specifies an absolute path:
+
+            %s
+
+        setup() arguments must *always* be /-separated paths relative to the
+        setup.py directory, *never* absolute paths.
+        """
+        ).lstrip()
+        % path
+    )
+    raise DistutilsSetupError(msg)
+
+
+class _IncludePackageDataAbuse:
+    """Inform users that package or module is included as 'data file'"""
+
+    class _Warning(SetuptoolsDeprecationWarning):
+        _SUMMARY = """
+        Package {importable!r} is absent from the `packages` configuration.
+        """
+
+        _DETAILS = """
+        ############################
+        # Package would be ignored #
+        ############################
+        Python recognizes {importable!r} as an importable package[^1],
+        but it is absent from setuptools' `packages` configuration.
+
+        This leads to an ambiguous overall configuration. If you want to distribute this
+        package, please make sure that {importable!r} is explicitly added
+        to the `packages` configuration field.
+
+        Alternatively, you can also rely on setuptools' discovery methods
+        (for example by using `find_namespace_packages(...)`/`find_namespace:`
+        instead of `find_packages(...)`/`find:`).
+
+        You can read more about "package discovery" on setuptools documentation page:
+
+        - https://setuptools.pypa.io/en/latest/userguide/package_discovery.html
+
+        If you don't want {importable!r} to be distributed and are
+        already explicitly excluding {importable!r} via
+        `find_namespace_packages(...)/find_namespace` or `find_packages(...)/find`,
+        you can try to use `exclude_package_data`, or `include-package-data=False` in
+        combination with a more fine grained `package-data` configuration.
+
+        You can read more about "package data files" on setuptools documentation page:
+
+        - https://setuptools.pypa.io/en/latest/userguide/datafiles.html
+
+
+        [^1]: For Python, any directory (with suitable naming) can be imported,
+              even if it does not contain any `.py` files.
+              On the other hand, currently there is no concept of package data
+              directory, all directories are treated like packages.
+        """
+        # _DUE_DATE: still not defined as this is particularly controversial.
+        # Warning initially introduced in May 2022. See issue #3340 for discussion.
+
+    def __init__(self):
+        self._already_warned = set()
+
+    def is_module(self, file):
+        return file.endswith(".py") and file[: -len(".py")].isidentifier()
+
+    def importable_subpackage(self, parent, file):
+        pkg = Path(file).parent
+        parts = list(itertools.takewhile(str.isidentifier, pkg.parts))
+        if parts:
+            return ".".join([parent, *parts])
+        return None
+
+    def warn(self, importable):
+        if importable not in self._already_warned:
+            self._Warning.emit(importable=importable)
+            self._already_warned.add(importable)