two version of R2R are here HEAD master

1 files changed, 124 insertions, 0 deletions

diff --git a/.venv/lib/python3.12/site-packages/fsspec/implementations/jupyter.py b/.venv/lib/python3.12/site-packages/fsspec/implementations/jupyter.py
new file mode 100644
index 00000000..2839f4c1
--- /dev/null
+++ b/.venv/lib/python3.12/site-packages/fsspec/implementations/jupyter.py
@@ -0,0 +1,124 @@
+import base64
+import io
+import re
+
+import requests
+
+import fsspec
+
+
+class JupyterFileSystem(fsspec.AbstractFileSystem):
+    """View of the files as seen by a Jupyter server (notebook or lab)"""
+
+    protocol = ("jupyter", "jlab")
+
+    def __init__(self, url, tok=None, **kwargs):
+        """
+
+        Parameters
+        ----------
+        url : str
+            Base URL of the server, like "http://127.0.0.1:8888". May include
+            token in the string, which is given by the process when starting up
+        tok : str
+            If the token is obtained separately, can be given here
+        kwargs
+        """
+        if "?" in url:
+            if tok is None:
+                try:
+                    tok = re.findall("token=([a-z0-9]+)", url)[0]
+                except IndexError as e:
+                    raise ValueError("Could not determine token") from e
+            url = url.split("?", 1)[0]
+        self.url = url.rstrip("/") + "/api/contents"
+        self.session = requests.Session()
+        if tok:
+            self.session.headers["Authorization"] = f"token {tok}"
+
+        super().__init__(**kwargs)
+
+    def ls(self, path, detail=True, **kwargs):
+        path = self._strip_protocol(path)
+        r = self.session.get(f"{self.url}/{path}")
+        if r.status_code == 404:
+            return FileNotFoundError(path)
+        r.raise_for_status()
+        out = r.json()
+
+        if out["type"] == "directory":
+            out = out["content"]
+        else:
+            out = [out]
+        for o in out:
+            o["name"] = o.pop("path")
+            o.pop("content")
+            if o["type"] == "notebook":
+                o["type"] = "file"
+        if detail:
+            return out
+        return [o["name"] for o in out]
+
+    def cat_file(self, path, start=None, end=None, **kwargs):
+        path = self._strip_protocol(path)
+        r = self.session.get(f"{self.url}/{path}")
+        if r.status_code == 404:
+            return FileNotFoundError(path)
+        r.raise_for_status()
+        out = r.json()
+        if out["format"] == "text":
+            # data should be binary
+            b = out["content"].encode()
+        else:
+            b = base64.b64decode(out["content"])
+        return b[start:end]
+
+    def pipe_file(self, path, value, **_):
+        path = self._strip_protocol(path)
+        json = {
+            "name": path.rsplit("/", 1)[-1],
+            "path": path,
+            "size": len(value),
+            "content": base64.b64encode(value).decode(),
+            "format": "base64",
+            "type": "file",
+        }
+        self.session.put(f"{self.url}/{path}", json=json)
+
+    def mkdir(self, path, create_parents=True, **kwargs):
+        path = self._strip_protocol(path)
+        if create_parents and "/" in path:
+            self.mkdir(path.rsplit("/", 1)[0], True)
+        json = {
+            "name": path.rsplit("/", 1)[-1],
+            "path": path,
+            "size": None,
+            "content": None,
+            "type": "directory",
+        }
+        self.session.put(f"{self.url}/{path}", json=json)
+
+    def _rm(self, path):
+        path = self._strip_protocol(path)
+        self.session.delete(f"{self.url}/{path}")
+
+    def _open(self, path, mode="rb", **kwargs):
+        path = self._strip_protocol(path)
+        if mode == "rb":
+            data = self.cat_file(path)
+            return io.BytesIO(data)
+        else:
+            return SimpleFileWriter(self, path, mode="wb")
+
+
+class SimpleFileWriter(fsspec.spec.AbstractBufferedFile):
+    def _upload_chunk(self, final=False):
+        """Never uploads a chunk until file is done
+
+        Not suitable for large files
+        """
+        if final is False:
+            return False
+        self.buffer.seek(0)
+        data = self.buffer.read()
+        self.fs.pipe_file(self.path, data)