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#!/usr/bin/env python
"""Basic setup script for gn3"""
from setuptools import setup # type: ignore
from setup_commands import RunTests
def long_description():
"""Retrieve long description from the README file."""
with open('README.md', encoding="utf-8") as readme:
return readme.read()
setup(author='Bonface M. K.',
author_email='me@bonfacemunyoki.com',
description=('GeneNetwork3 REST API for data '
'science and machine learning'),
install_requires=[
"bcrypt>=3.1.7"
"click"
"Flask==1.1.2"
"mypy==0.790"
"mypy-extensions==0.4.3"
"mysqlclient==2.0.1"
"numpy==1.20.1"
"pylint==2.5.3"
"pymonad"
"redis==3.5.3"
"requests==2.25.1"
"scipy==1.6.0"
"plotly==4.14.3"
"pyld"
"flask-cors==3.0.9"
"xapian-bindings"
],
scripts=["scripts/index-genenetwork"],
license='GPLV3',
long_description=long_description(),
long_description_content_type='text/markdown',
name='gn3',
packages=[
'gn3',
'gn3.api',
'gn3.computations',
'gn3.db',
'tests'
],
url='https://github.com/genenetwork/genenetwork3',
version='0.1',
tests_require=["pytest", "hypothesis"],
cmdclass={
"run_tests": RunTests ## testing
})
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