1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
|
"""Module Contains code for making request to fahamu Api"""
# pylint: disable=C0301
import json
import time
from requests import Session
from requests.adapters import HTTPAdapter
from requests.adapters import Retry
from gn3.llms.errors import LLMError
class TimeoutHTTPAdapter(HTTPAdapter):
"""Set a default timeout for HTTP calls """
def __init__(self, timeout, *args, **kwargs):
"""TimeoutHTTPAdapter constructor."""
self.timeout = timeout
super().__init__(*args, **kwargs)
def send(self, *args, **kwargs):
"""Override :obj:`HTTPAdapter` send method to add a default timeout."""
kwargs["timeout"] = (
kwargs["timeout"] if kwargs.get("timeout") else self.timeout
)
return super().send(*args, **kwargs)
class GeneNetworkQAClient(Session):
"""GeneNetworkQA Client
This class provides a client object interface to the GeneNetworkQA API.
It extends the `requests.Session` class and includes authorization,
base URL,
request timeouts, and request retries.
Args:
api_key (str): API key.
timeout (int, optional): Timeout value, defaults to 5.
total_retries (int, optional): Total retries value, defaults to 5.
backoff_factor (int, optional): Retry backoff factor value,
defaults to 30.
Usage:
from genenetworkqa import GeneNetworkQAClient
gnqa = GeneNetworkQAClient(account="account-name",
api_key="XXXXXXXXXXXXXXXXXXX...")
"""
def __init__(self, api_key, timeout=30,
total_retries=5, backoff_factor=2):
super().__init__()
self.headers.update(
{"Authorization": "Bearer " + api_key})
self.base_url = "https://genenetwork.fahamuai.com/api/tasks"
self.answer_url = f"{self.base_url}/answers"
self.feedback_url = f"{self.base_url}/feedback"
self.query = ""
adapter = TimeoutHTTPAdapter(
timeout=timeout,
max_retries=Retry(
total=total_retries,
status_forcelist=[429, 500, 502, 503, 504],
backoff_factor=backoff_factor,
),
)
self.mount("https://", adapter)
self.mount("http://", adapter)
@staticmethod
def negative_status_msg(response):
""" handler for non 200 response from fahamu api"""
return f"Error: Status code -{response.status_code}- Reason::{response.reason}"
def ask(self, ex_url, query, *args, **kwargs):
"""fahamu ask api interface"""
self.query = query
res = self.custom_request('POST', f"{self.base_url}{ex_url}", *args, **kwargs)
return res, json.loads(res.text)
def get_answer(self, task_obj, *args, **kwargs):
"""Fahamu get answer interface"""
query = f"{self.answer_url}?task_id={task_obj['task_id']}"
res = self.custom_request('GET', query, *args, **kwargs)
return res, 1
def custom_request(self, method, url, *args, **kwargs):
"""
Make a custom request to the Fahamu API
Note: We cannot use the adapter above because Fahamu does not
have a task_id status tracking system.
If you query for a Fahamu task_id,
you might receive `{message: No data}` with a 200 status code.
This response is not conclusive since the task might be incomplete
and the status code is incorrect as well.
"""
max_retries = 50
retry_delay = 3
response_msg = {
404: "Api endpoint Does not exist",
500: "Use of Invalid Token/or the Fahamu Api is currently down",
400: "You sent a bad Fahamu request",
401: "You do not have authorization to perform the request",
}
for _i in range(max_retries):
response = super().request(method, url, *args, **kwargs)
if response.ok:
if method.lower() == "get" and not response.json().get("data"):
# note this is a dirty trick to check if fahamu has returned the results
# the issue is that the api only returns 500 or 200 satus code
# TODO: fix this on their end
time.sleep(retry_delay)
continue
return response
else:
raise LLMError(f"Request error with code:\
{response.status_code} occurred with reason:\
{response_msg.get(response.status_code,response.reason)}",
self.query)
#time.sleep(retry_delay)
raise LLMError("Timeout error: We couldn't provide a response,Please try\
to rephrase your question to receive feedback",
self.query)
|
