genenetwork3 - GeneNetwork3 REST API for data science and machine learning

Age	Commit message (Expand)	Author
2023-08-02	Remove ORM-dependent `insert` function	Frederick Muriuki Muriithi
2023-08-02	Remove ORM-dependent `fetchall` and `fetchone` functions	Frederick Muriuki Muriithi
2023-07-19	Extract code dealing with ProbeSets to their own module.	Frederick Muriuki Muriithi
2023-07-11	Revert "Skip tests broken by Python-3.10 temporarily"	Frederick Muriuki Muriithi
2023-07-05	Skip tests broken by Python-3.10 temporarily	Frederick Muriuki Muriithi
2023-03-20	Fix get_all_species test	zsloan
2022-05-27	Move sql for CRUD operations on case-attrs from gn2 to gn3	BonfaceKilz
2022-05-27	Move sql for modifying case-attributes from gn2 to gn3	BonfaceKilz
2022-05-27	Return all the results from CaseAttributes column as is	BonfaceKilz
2022-05-26	Add Endpoint to get menu items for use in UI	Frederick Muriuki Muriithi
2022-04-12	Test that a carriage return is removed when generating csv	BonfaceKilz
2022-04-07	Use case attribute id inside brackets if present during insertions	BonfaceKilz
2022-04-07	Use case attribute id inside brackets if present during insertions	BonfaceKilz
2022-04-07	Use case attribute id inside brackets if present during updates	BonfaceKilz
2022-04-07	Add method for fetching the case_attributes	BonfaceKilz
2022-04-01	Run python-black in file	BonfaceKilz
2022-03-12	Fix pylint errors in unit_tests	BonfaceKilz
2022-03-12	Append the strain name when extracting "actions"	BonfaceKilz
2022-03-12	Apply auto-pep8 to sample_data.py and it's test file	BonfaceKilz
2022-03-12	Update how data is updated by re-using existing functions	BonfaceKilz
2022-03-12	Create action dict that's created when updating data	BonfaceKilz
2022-03-12	Add test cases for inserting and deleting data	BonfaceKilz
2022-03-12	Remove test cases related to sample data	BonfaceKilz
2022-03-12	Append case attributes to csv data if they exist	BonfaceKilz
2022-02-21	Fix minor issues introduced while fixing linting errors	Frederick Muriuki Muriithi
2022-02-21	Fix a myriad of linter issues	Frederick Muriuki Muriithi
2022-02-21	Add test to ensure samples are read correctly from .geno files	Frederick Muriuki Muriithi
2022-02-18	Remove erroneous test based on wrong assumptions	Frederick Muriuki Muriithi
2022-02-17	Use pytest's "mark" feature to categorise tests	Frederick Muriuki Muriithi
2022-02-09	Remove obsolete `PublishFreeze` table	Frederick Muriuki Muriithi
2022-01-05	test_traits.py: Update failing test	BonfaceKilz
2021-12-14	Provide expected values to use for tests	Frederick Muriuki Muriithi
2021-11-23	Fix a myriad of linting errors	Frederick Muriuki Muriithi
2021-11-22	Add test to query builders	Frederick Muriuki Muriithi
2021-10-19	Disable pylint issue	Frederick Muriuki Muriithi
2021-10-19	Move `export_informative` function to `gn3.db.traits` module	Frederick Muriuki Muriithi
2021-10-19	Move 'export_trait_data' to 'gn3.db.traits' module	Frederick Muriuki Muriithi
2021-09-27	Update terminology: `riset` to `group`	Frederick Muriuki Muriithi
2021-09-23	Refactor: Move common sample data to separate file	Frederick Muriuki Muriithi
2021-09-22	Fix more pylint errors	Frederick Muriuki Muriithi
2021-09-15	Add missing sample file for tests	Frederick Muriuki Muriithi
2021-09-01	Fix linting and typing issues	Muriithi Frederick Muriuki
2021-09-01	Built top-level genotype file parsing function	Muriithi Frederick Muriuki
2021-09-01	Parse data lines into markers	Muriithi Frederick Muriuki
2021-09-01	Parse the genotype file's data header	Muriithi Frederick Muriuki
2021-09-01	Implement parsing of genotype labels	Muriithi Frederick Muriuki
2021-08-09	Set up the trait dataset type correctly	Muriithi Frederick Muriuki
2021-08-09	Fix linting errors	Muriithi Frederick Muriuki
2021-08-08	Update tests	Muriithi Frederick Muriuki
2021-08-05	Reorganise the database code	Muriithi Frederick Muriuki