| Age | Commit message (Expand) | Author |
|---|---|---|
| 2021-05-15 | index lit tuple result | Alexander Kabui |
| 2021-05-12 | delete unused functions | Alexander Kabui |
| 2021-05-12 | rename lit_correlation_for_trait_list to lit_correlation_for_trait | Alexander Kabui |
| 2021-05-12 | rename tissue_correlation_for_trait_list with tissue_correlation_for_trait | Alexander Kabui |
| 2021-05-12 | rename p_val ro tissue_p_value for tissue_results | Alexander Kabui |
| 2021-05-03 | minor fixes for tiss correlation tests and naming | Alexander Kabui |
| 2021-05-03 | replace database with conn | Alexander Kabui |
| 2021-04-18 | refactor:return trait_name in corr_results | Alexander Kabui |
| 2021-04-17 | ad pep8 formatting | Alexander Kabui |
| 2021-04-17 | refactor tests for lit | Alexander Kabui |
| 2021-04-15 | optimization for sample correlation | Alexander Kabui |
| 2021-04-12 | fix tests for lit correlation | Alexander Kabui |
| 2021-04-12 | fix merge conflict | Alexander Kabui |
| 2021-04-12 | Integrate correlation API...- add new api for gn2-gn3 sample r integration - delete map for sample list to values - add db util file - add python msql-client dependency - add db for fetching lit correlation results - add unittests for db utils - add tests for db_utils - modify api for fetching lit correlation results - refactor Mock Database Connector and unittests - add sql url parser - add SQL URI env variable - refactor code for db utils - modify return data for lit correlation - refactor tissue correlation endpoint - replace db_instance with conn | Alexander Kabui |
| 2021-04-06 | fix Docstrings | Alexander Kabui |
| 2021-03-16 | Refactor/clean up correlations (#4)...* initial commit for Refactor/clean-up-correlation * add python scipy dependency * initial commit for sample correlation * initial commit for sample correlation endpoint * initial commit for integration and unittest * initial commit for registering correlation blueprint * add and modify unittest and integration tests for correlation * Add compute compute_all_sample_corr method for correlation * add scipy to requirement txt file * add tissue correlation for trait list * add unittest for tissue correlation * add lit correlation for trait list * add unittests for lit correlation for trait list * modify lit correlarion for trait list * add unittests for lit correlation for trait list * add correlation metho in dynamic url * add file format for expected structure input while doing sample correlation * modify input data structure -> add trait id * update tests for sample r correlation * add compute all lit correlation method * add endpoint for computing lit_corr * add unit and integration tests for computing lit corr * add /api/correlation/tissue_corr/{corr_method} endpoint for tissue correlation * add unittest and integration tests for tissue correlation Co-authored-by: BonfaceKilz <bonfacemunyoki@gmail.com> | Alexander Kabui |
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| GeneNetwork3 REST API for data science and machine learning |
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