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Enable running commands:
- `python3 setup.py unit_check`: run the unit tests
- `python3 setup.py integration_check`: run integration tests
- `python3 setup.py performance_check`: run performance tests
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* gn3/settings.py (SQLALCHEMY_TRACK_MODIFICATIONS): Delete variable.
* guix.scm (genenetwork3)[propagated-inputs]: Remove python-sqlalchemy-stubs.
* setup.py: Remove sqlalchemy-stubs from install_requires.
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* Add some dependencies used by the system that were missing in the test
environment, leading to the pylint step failing.
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