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AgeCommit message (Expand)Author
2024-07-23refactor: rename addRIf to update_rif_table.pyJohn Nduli
2024-07-12Rename hash_rdf_graph -> md5hash_ttl_dir.Munyoki Kilyungi
2024-07-12Use correct ttl-dir path when generating checksums.Munyoki Kilyungi
2024-07-12fix: remove .py extension for addRif to prevent pylint checksJohn Nduli
2024-07-12refactor: fix mypy and pylint errorsJohn Nduli
2024-07-12feat: copy addRif script from genenetwork1John Nduli
2024-07-08Pass output directory to R/qtl script instead of pulling it from thezsloan
2024-07-03Return a "-1" if the turtle directory does not exist.Munyoki Kilyungi
2024-07-03Generate a checksum for all the ttl files.Munyoki Kilyungi
2024-07-03Add type-hints to hash_generif_graph.Munyoki Kilyungi
2024-07-03Refactor how the generif md5 sum is calculated and stored in XAPIAN.Munyoki Kilyungi
2024-07-03Use correct cache for RIF/Wiki entries.Munyoki Kilyungi
2024-07-03feat: drop intermediate folders when running parallel xapian compactJohn Nduli
2024-07-03feat: add support for parallel xapian compactJohn Nduli
2024-07-03feat: index rif and wiki without positionsJohn Nduli
2024-07-03feat: drop common words when building rdf cachesJohn Nduli
2024-07-03feat: set 67 parallel processes to run in prodJohn Nduli
2024-07-03fix: remove namespaces since child processes copy the rdf cachesJohn Nduli
2024-07-03fix: use correct prefix and index key; group wiki cache queryJohn Nduli
2024-07-03feat: add wikidata indexingJohn Nduli
2024-07-03feat: add global wikicacheJohn Nduli
2024-07-03feat: add sparql query to get wikidataJohn Nduli
2024-06-24Use dataset Name instead of FullName for indexingzsloan
2024-06-18Revert "Set the file path for the logger."Munyoki Kilyungi
2024-06-18refactor: drop global variablesJohn Nduli
2024-06-17Check table names in Xapian; if not, default to "-1".Munyoki Kilyungi
2024-06-17Fetch distinct comments.Munyoki Kilyungi
2024-06-14fix: typehints in index-genenetwork scriptJohn Nduli
2024-06-14fix: fix incorrect parameters in index_query functionJohn Nduli
2024-06-12Move the generated xapian files to the correct directory.Munyoki Kilyungi
2024-06-12Set the file path for the logger.Munyoki Kilyungi
2024-06-12Change the date format for the logger.Munyoki Kilyungi
2024-06-12Log how long it takes to run the indexing script.Munyoki Kilyungi
2024-06-12Check for a running process by viewing the build dir's contents.Munyoki Kilyungi
2024-06-12Return 0 if data changes, else exit with 1.Munyoki Kilyungi
2024-06-12Explicitly pass sparql_uri to script.Munyoki Kilyungi
2024-06-12Rework how the indexes are built.Munyoki Kilyungi
2024-06-12Add method to check the validity of the tables+RDF checksums.Munyoki Kilyungi
2024-06-12Generate a SHA256 checksum for the generif graph.Munyoki Kilyungi
2024-06-01Use global cache to store generif metadata.Munyoki Kilyungi
2024-06-01Add geneRIF to gene index.Munyoki Kilyungi
2024-03-18pep8 formattingAlexander_Kabui
2024-03-18pep8 formattingAlexander_Kabui
2024-03-15add pubmed metadataAlexander_Kabui
2024-03-13Add documentation on what the script is for and does.Frederick Muriuki Muriithi
2024-03-13Remove debug prints in the scriptFrederick Muriuki Muriithi
2024-03-12Commit migration script for CaseAttribute* tablesFrederick Muriuki Muriithi
2023-12-05Move script to gn-authFrederick Muriuki Muriithi
2023-11-02Make scripts directory a package to eliminate path issues.Frederick Muriuki Muriithi
2023-10-27Make scripts/ a module since it referenced in argparse_actions.py.Munyoki Kilyungi
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-25 08:15:23 +0000