index
:
genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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Author
2024-01-03
load gn3 secret file
Alexander_Kabui
2024-01-03
Do not log user information.
Arun Isaac
2023-12-29
handle exception for request error
Alexander_Kabui
2023-12-29
fix mypy issues
Alexander_Kabui
2023-12-22
Feature/gn llms (#140)
Alexander Kabui
2023-12-15
Update RDF ProbeSet query.
Munyoki Kilyungi
2023-12-15
First frame and then compact probeset results.
Munyoki Kilyungi
2023-12-15
Update ProbeSet's context.
Munyoki Kilyungi
2023-12-15
Update BASE_CONTEXT entries.
Munyoki Kilyungi
2023-12-07
Fix typo in GoTree prefix.
Munyoki Kilyungi
2023-12-07
Add optional property for platform info in dataset representation.
Munyoki Kilyungi
2023-12-07
Fetch normalization metadata correctly.
Munyoki Kilyungi
2023-12-07
Fix typo in platform prefix.
Munyoki Kilyungi
2023-12-07
Refactor metadata mappings for improved dataset representation.
Munyoki Kilyungi
2023-12-07
Update phenotype queries to use gnt:belongsToGroup.
Munyoki Kilyungi
2023-11-30
Add a phenotype's chromosome location to the Phenotype fetch.
Munyoki Kilyungi
2023-11-30
Place publication details on a sub-graph of its own.
Munyoki Kilyungi
2023-11-30
Replace LRS with lodScore.
Munyoki Kilyungi
2023-11-27
Remove unused variable "args".
Munyoki Kilyungi
2023-11-27
Attach phenotype endpoints to one function.
Munyoki Kilyungi
2023-11-27
Use "dcat:Dataset" when framing when fetching phenotypes.
Munyoki Kilyungi
2023-11-27
Construct a more semantic graph for phenotypes.
Munyoki Kilyungi
2023-11-27
Remove unused argument during template substitution.
Munyoki Kilyungi
2023-11-27
Replace "ex:" prefix with a semantic prefix when fetching phenotype.
Munyoki Kilyungi
2023-11-27
Add "gnt:abbreviation" and "ex:inbredSet" to PHENOTYPE_CONTEXT.
Munyoki Kilyungi
2023-11-27
Add "ex:species" to phenotypes json-ld context.
Munyoki Kilyungi
2023-11-27
Return distinct results after a dataset search.
Munyoki Kilyungi
2023-11-27
Add ex:pages and ex:hits to the search context.
Munyoki Kilyungi
2023-11-27
First fram and compact the jsonld results during dataset search.
Munyoki Kilyungi
2023-11-27
Add "inbredSet" to the dataset's search context.
Munyoki Kilyungi
2023-11-27
Fetch a dataset's contributors in RDF.
Munyoki Kilyungi
2023-11-27
Fetch dataset specifics in RDF.
Munyoki Kilyungi
2023-11-02
Remove files depending on yoyo-migrations.
Frederick Muriuki Muriithi
2023-10-27
Refactor to use new rdf.query_* abstractions.
Munyoki Kilyungi
2023-10-27
Fix pylint error.
Munyoki Kilyungi
2023-10-27
Refactor to use new rdf.query_* abstractions.
Munyoki Kilyungi
2023-10-27
Add functions that wrap around the common jsonld patterns.
Munyoki Kilyungi
2023-10-27
Break up long line.
Munyoki Kilyungi
2023-10-27
Remove reimport "Optional".
Munyoki Kilyungi
2023-10-27
Ignore construct result for mypy compliance
Munyoki Kilyungi
2023-10-27
Make implicit optional type hints PEP 484 compliant.
Munyoki Kilyungi
2023-10-27
Abstract out (sparql) CONSTRUCT into a function.
Munyoki Kilyungi
2023-10-27
Delete unused imports.
Munyoki Kilyungi
2023-10-27
Remove duplicate key in dictionary.
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/probesets/:name".
Munyoki Kilyungi
2023-10-27
Delete duplicate function.
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/groups/:name".
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/group".
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/species/:name".
Munyoki Kilyungi
2023-10-27
Implement "GET /metadata/species".
Munyoki Kilyungi
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