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AgeCommit message (Expand)Author
2023-10-06pylint: fix variable name.Frederick Muriuki Muriithi
2023-10-06Make argument mandatoryFrederick Muriuki Muriithi
2023-10-06Get `CORRELATION_COMMAND` from current_app not `gn3.settings`Frederick Muriuki Muriithi
2023-10-06Provide keyword argument.Frederick Muriuki Muriithi
2023-10-06Pass in configs/settings as function argumentsFrederick Muriuki Muriithi
2023-10-06Settings: Add note to discourage importing directly from defaultsFrederick Muriuki Muriithi
2023-09-21Fix query in update_cross_referencezsloan
2023-09-05Delete un-used importMunyoki Kilyungi
2023-09-05Fix C3001: Lambda expression assigned to a variableMunyoki Kilyungi
2023-09-05Remove un-necessary ellipsisMunyoki Kilyungi
2023-09-05Remove un-necessary string concatenationMunyoki Kilyungi
2023-09-05Remove pylint skipMunyoki Kilyungi
2023-09-05Replace "escape_string" with safe-query parametersMunyoki Kilyungi
2023-09-05Remove type annotations for "none_case_attrs" variablesMunyoki Kilyungi
2023-08-24Change get_pheno_csv_sample_data to use group ID instead of phenotype IDzsloan
2023-08-18Commit on success, rollback on error.Frederick Muriuki Muriithi
2023-08-17Fix query for fetching DataId when inserting ProbeSet datazsloan
2023-08-17Fix a couple remaining issues with function parameterszsloan
2023-08-17Combine pheno/mrna update functions + some other fixeszsloan
2023-08-17Fix queries for fetching group nameszsloan
2023-08-17Fix fetch_trait query for phenotypeszsloan
2023-08-17Fix a few misnamed tables in mrna delete/insert functionszsloan
2023-08-17Implement ProbeSet sample data editingzsloan
2023-08-17Fix probeset sample data and CSV sample data functionszsloan
2023-08-17Fix query for retrieving mrna dataset group namezsloan
2023-08-17Fix get_mrna_sample_data queryzsloan
2023-08-17Fix mrna group name queryzsloan
2023-08-17Remove Id select from probeset metadata query, since it's included in colszsloan
2023-08-17Add function for retrieving mRNA Assay group namezsloan
2023-08-17Make several sample_data fetching functions specific to phenotype or mrna ass...zsloan
2023-08-04Remove the ORM-dependent `update` function.Frederick Muriuki Muriithi
2023-08-02Add deprecation notice to ORM-dependent `update` functionFrederick Muriuki Muriithi
2023-08-02Remove ORM-dependent `insert` functionFrederick Muriuki Muriithi
2023-08-02Remove ORM-dependent `fetchall` and `fetchone` functionsFrederick Muriuki Muriithi
2023-08-02Integrate Temp traits to AuthFrederick Muriuki Muriithi
2023-07-31Fix typing issueFrederick Muriuki Muriithi
2023-07-31Fix linting and typing issues.Frederick Muriuki Muriithi
2023-07-31Fix bugs. Return resource without data items.Frederick Muriuki Muriithi
2023-07-31Paginate the resource data items.Frederick Muriuki Muriithi
2023-07-26Fix variable name.Frederick Muriuki Muriithi
2023-07-26Remove debug statement.Frederick Muriuki Muriithi
2023-07-26Fetch `metadata_audit` trail with direct query functions.Frederick Muriuki Muriithi
2023-07-26Function to create a metadata audit trail.Frederick Muriuki Muriithi
2023-07-21Add some debug utilities.Frederick Muriuki Muriithi
2023-07-21Update a Publication in the database.Frederick Muriuki Muriithi
2023-07-21Fetch a publication by its PubMed IDFrederick Muriuki Muriithi
2023-07-21Rename function: fetch_publication ==> fetch_publication_by_idFrederick Muriuki Muriithi
2023-07-19Extract code dealing with ProbeSets to their own module.Frederick Muriuki Muriithi
2023-07-19Extract reusable code to separate moduleFrederick Muriuki Muriithi
2023-07-18Bug: Change from `_id` to `id_` to avoid downstream breakage.Frederick Muriuki Muriithi
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