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2024-09-05Set OPTIONAL values to default to an empty string.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Rename "pubmed_id" -> "pubmed_ids" to be explicit it's an array.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Remove type from wiki history.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Fix type error.Munyoki Kilyungi
* gn3/api/metadata_api/wiki.py: Remove FIXME comment. * gn3/db/wiki.py: Fix type error. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Use the correct header to request json-ld data.Munyoki Kilyungi
In HTTP, we use content negotiation to server different representations of a resource to the same URI to help the user agent specify which representation is best suited for the user: <https://developer.mozilla.org/en-US/docs/Web/HTTP/Content_negotiation> The "Accept" requet HTTP indicates which content types the user is supposed to understand: <https://developer.mozilla.org/en-US/docs/Web/HTTP/Headers/Accept> * gn3/api/metadata_api/wiki.py (get_wiki_entries): Use the "Accept" header. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Add comment history.Munyoki Kilyungi
* gn3/api/metadata_api/wiki.py: Import get_comment_history. (get_history): New end-point. * gn3/db/rdf/wiki.py: (get_comment_history): New function. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Always output the top-level graph when compacting.Munyoki Kilyungi
This makes sure that the API is always consistent. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Use correct prefix when querying for email in triple.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Create global wiki context usable by all functions in gn3.rdf.wikiMunyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Ignore type error and add a FIXME stub.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Add missing doc-strings to make pylint pass.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Restructure RDF module.Munyoki Kilyungi
* gn3/api/metadata.py: Import constants from gn3.db.rdf * gn3/api/metadata_api/wiki.py: Ditto. Import "get_wiki_entries_by_symbol" from gn3.db.rdf.wiki. * gn3/db/constants.py: Delete file and move all constants ... * gn3/db/rdf.py: ... and functions ... * gn3/db/rdf/__init__.py: ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-09-05Sort previos records by datetime.Alexander_Kabui
2024-09-05Apply pep8 formatting.Alexander_Kabui
2024-09-05Create new endpoints for fetching user previous records.Alexander_Kabui
2024-09-03Remove unused imports.Alexander_Kabui
2024-09-03Use Jsonb for storing results.Alexander_Kabui
2024-09-03Raise KeyError for doc_id not found in doc_ids.Alexander_Kabui
2024-09-02Remove redundant function for fetching data with task_id.Alexander_Kabui
2024-09-02Modify default backoff_factor for adapter.Alexander_Kabui
2024-09-02Add docs for custom request method.Alexander_Kabui
2024-09-02Rename task_id to task_object.Alexander_Kabui
2024-09-02Refactor doc_id object.Alexander_Kabui
2024-09-02Remove unecessary check for open file.Alexander_Kabui
2024-09-02Fix minor syntax issue.Alexander_Kabui
2024-09-02Fix spacing after punctuation.Alexander_Kabui
2024-09-02Use default datetime for table.Alexander_Kabui
2024-09-02Add spacing after punctuation.Alexander_Kabui
2024-08-30Fix merge conflict.Alexander_Kabui
2024-08-29chore: pylint docstringJohn Nduli
2024-08-29docs: add function commentsJohn Nduli
2024-08-29feat: add api calls to get categories and last commentJohn Nduli
2024-08-29Add default timestamp and and primary key for Rating table.Alexander_Kabui
2024-08-29Fix minor typo.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Remove "@id" re-map in the json-ld base context.Munyoki Kilyungi
* gn3/db/constants.py [BASE_CONTEXT]: Remove "id" key. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Fetch the latest comment by the versionId.Munyoki Kilyungi
* gn3/db/rdf.py (get_wiki_entries_by_symbol): Update query to fetch the latest query by the version. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Make fetching wiki entries by symbol case insensitive.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Add "created" to wiki return.Munyoki Kilyungi
* gn3/db/rdf.py (get_wiki_entries_by_symbol): Add "created" to dictionary. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Update doc-string for "handle_sparql_errors".Munyoki Kilyungi
* gn3/errors.py (handle_sparql_errors): Correct the doc-string. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Return the correct status error code for url errors.Munyoki Kilyungi
* gn3/errors.py (url_server_error): Return a 500 http status code for URL server errors. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-29Add logging for gn llm errors.Alexander_Kabui
2024-08-29Check for empty values when fetching search history.Alexander_Kabui
2024-08-29Use correct http method `Delete` for search history.Alexander_Kabui
2024-08-29Update gnqa search endpoint from POST to PUT.Alexander_Kabui
2024-08-26Fix mypy errors.Munyoki Kilyungi
Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-26Move "GET /wiki/<symbol>" end-point to gn3.api.metadata.wiki.Munyoki Kilyungi
* gn3/api/metadata.py (get_wiki_entries): Move this... * gn3/api/metadata_api/wiki.py (edit_wiki): ... here. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-26Auto-pep8 buffer and ignore type check for payload.Munyoki Kilyungi
* gn3/api/metadata_api/wiki.py (edit_wiki): Ignore type-check for payload. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-26Fix pylint errors.Munyoki Kilyungi
* gn3/api/metadata.py: Remove duplicate imports. * gn3/db/constants.py: Add docstring. * gn3/db/rdf.py (get_wiki_entries_by_symbol): Remove duplicate dictionary key. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-26Fix handling of sparql errors.Munyoki Kilyungi
* gn3/errors.py (handle_sparql_errors): Use the exception's class name to fetch the status code. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
2024-08-26If there's no data, return a 404.Munyoki Kilyungi
* gn3/api/metadata.py (get_wiki_entries): Return an empty {} when there's no data. * gn3/db/rdf.py (query_frame_and_compact): Delete check for empty results. Instead just return the context as is. (query_and_compact): Ditto. (query_and_frame): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com>
generated by cgit v1.2.3 (git 2.44.0) at 2024-11-22 22:22:41 +0000