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AgeCommit message (Expand)Author
2024-09-30chore: pylint code fixJohn Nduli
2024-09-30feat: rollback mysql transaction when rdf insert failsJohn Nduli
2024-09-30fix: rdf and sql queries for fetching rif dataJohn Nduli
2024-09-27Debug command.Frederick Muriuki Muriithi
2024-09-27Bug: Use absolute paths in place of relative paths.Frederick Muriuki Muriithi
2024-09-27Bug: Use absolute path in place of relative pathFrederick Muriuki Muriithi
2024-09-23Revert "Remove one-line if/else statement."Munyoki Kilyungi
2024-09-23Remove one-line if/else statement.Munyoki Kilyungi
2024-09-23Use correct object modifier for a label when inserting a comment.Munyoki Kilyungi
2024-09-23Update docstring for "update_wiki_comment".Munyoki Kilyungi
2024-09-23Use correct object modifier in triple when fetching comment history.Munyoki Kilyungi
2024-09-23Use correct modifier when getting species name in SPARQL.Munyoki Kilyungi
2024-09-23Remove dead variable from RDF query.Munyoki Kilyungi
2024-09-23Alphabetically sort the categories and pubmed_ids array.Munyoki Kilyungi
2024-09-23Remove un-necessary triple in comment history RDF query.Munyoki Kilyungi
2024-09-19Use correct return type.Munyoki Kilyungi
2024-09-19Remove extraneous keyword.Munyoki Kilyungi
2024-09-18Pass in insert_dict instead of payload in "get_wiki_entries".Munyoki Kilyungi
2024-09-18Pass in the createtime as an arg when inserting into RDF graph.Munyoki Kilyungi
2024-09-18Get the next versionId from SQL.Munyoki Kilyungi
2024-09-18Update "POST /wiki/comment_id/edit" to have RDF edits.Munyoki Kilyungi
2024-09-18Fix typo.Munyoki Kilyungi
2024-09-18Add method that inserts new RIF comments.Munyoki Kilyungi
2024-09-18Fetch symbol by it's name.Munyoki Kilyungi
2024-09-18Fetch the next comment version in RDF.Munyoki Kilyungi
2024-09-18Rename sparql_construct_query -> sparql_query.Munyoki Kilyungi
2024-09-18Add new method for updating RDF Graph content.Munyoki Kilyungi
2024-09-18Run python-black against file.Munyoki Kilyungi
2024-09-17Fix C0411/C0412 pylint errors in gn3.api.metadata.api.wiki.Munyoki Kilyungi
2024-09-17fix: error when result dict contains NoneJohn Nduli
2024-09-17feat: require auth for edit api callJohn Nduli
2024-09-12Fix pylint errors.Munyoki Kilyungi
2024-09-12feat: pick results from sqlite3 if they were storedJohn Nduli
2024-09-12Initialise the package to ensure setuptools finds it.Frederick Muriuki Muriithi
2024-09-12BugFix: assign value and use variable.Frederick Muriuki Muriithi
2024-09-12Fix failing tests after merging in Pjotr's pull request.Frederick Muriuki Muriithi
2024-09-12Gracefully print out debug messages even outside app contextFrederick Muriuki Muriithi
2024-09-12From gn3 only use TMPDIR/gn3 pathsPjotr Prins
2024-09-12Make sure dir exists before running R/qtlPjotr Prins
2024-09-12Replace TMPDIR/output with TMPDIR/gn3 so it is clear where it comes fromPjotr Prins
2024-09-12Modify script paths so they can be edited in GuixPjotr Prins
2024-09-12rqtl_wrapper: minor fixesPjotr Prins
2024-09-12Mistake using envvarPjotr Prins
2024-09-12Make sure TMPDIR directories exist!Pjotr Prins
2024-09-12Getting Rqtl to run on fallbackPjotr Prins
2024-09-12assert_paths_exist: make throw_error optionalPjotr Prins
2024-09-12gn3/errors.py: add stack trace to error logPjotr Prins
2024-09-12Move assert_paths_exist into fs_helpersPjotr Prins
2024-09-12Change behavior of do_paths_exist to actually throw useful errorPjotr Prins
2024-09-12Getting Rqtl to run on fallbackPjotr Prins