| Age | Commit message (Collapse) | Author | |
|---|---|---|---|
| 2024-08-01 | Add handler for unhandled exceptions from `gn3.oauth2` module. | Frederick Muriuki Muriithi | |
| 2024-08-01 | Update case-attribute editing to use new authorisation. | Frederick Muriuki Muriithi | |
| 2024-08-01 | Add `gn3.oauth2` module to handle authorisations | Frederick Muriuki Muriithi | |
| Add the `gn3.oauth2` which will handle the authorisations. It is intended to eventually replace the `gn3.auth` module which is a left over from when the authorisation server was part of GN3. | |||
| 2024-08-01 | Stem group field regardless of case. | Arun Isaac | |
| * gn3/api/search.py (parse_boolean_prefixed_field): New function. (parse_query): Use parse_boolean_prefixed_field for the group field. | |||
| 2024-08-01 | Stem all the time. | Arun Isaac | |
| With the STEM_SOME, xapian does not stem query words that start with a capital letter. Hence, we switch to the STEM_ALL strategy. * gn3/api/search.py (parse_query): Set stemming strategy to STEM_ALL. | |||
| 2024-07-08 | Pass output directory to R/qtl script instead of pulling it from the | zsloan | |
| environment Also fixes issue where the control marker keyword was wrong | |||
| 2024-07-05 | fix: return query error message from xapian | John Nduli | |
| 2024-07-03 | fix: use correct prefix and index key; group wiki cache query | John Nduli | |
| 2024-07-03 | feat: add wikidata prefix to search api | John Nduli | |
| 2024-06-26 | Increase max number of results to 50000 for Xapian search | zsloan | |
| This change needs to be accompanied by a change in GN2! If it's lower than the GN2 MAX_SEARCH_RESULTS value, searches will throw an error. | |||
| 2024-06-14 | fix: typehints in index-genenetwork script | John Nduli | |
| 2024-06-12 | refactor: add db_utils global logger that will be the default | John Nduli | |
| 2024-06-12 | fix: use current_app's logger to log db errors | John Nduli | |
| 2024-06-12 | fix: log errors when an exception occurs due to db_utils | John Nduli | |
| 2024-06-01 | Add geneRIF prefix. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-05-29 | Add delete functionality for gnqa history. | Alexander_Kabui | |
| 2024-05-27 | Add regular expressions for parsing links in texts. | Alexander_Kabui | |
| 2024-05-27 | Remove duplicate code for loading files. | Alexander_Kabui | |
| 2024-05-27 | Delete filter response text method and update relevant code. | Alexander_Kabui | |
| 2024-05-27 | Update Docstrings for Api endpoints and functions. | Alexander_Kabui | |
| 2024-05-24 | Add created_at timestamp for Rating table. | Alexander_Kabui | |
| 2024-05-24 | Add created_at timestamp to History table. | Alexander_Kabui | |
| 2024-05-24 | Pylint fixes. | Alexander_Kabui | |
| 2024-05-24 | Remove kwargs from LLMErrorr Exceptions and update relevant code. | Alexander_Kabui | |
| 2024-05-24 | Initiliaze second args to LLMError as query parameter. | Alexander_Kabui | |
| 2024-05-24 | Return first argument as error message. | Alexander_Kabui | |
| 2024-05-24 | Remove Try/Excepts from llm api endponts. | Alexander_Kabui | |
| 2024-05-24 | Removed status check on get_gnqa function. | Alexander_Kabui | |
| 2024-05-24 | Check for null and empty data results and update timeout message | Alexander_Kabui | |
| 2024-05-24 | Pass query as an argument to api_client ask method. | Alexander_Kabui | |
| 2024-05-24 | Initialize new class attribute self.query for to pass to LLMError. | Alexander_Kabui | |
| 2024-05-24 | Remove try/block for get_answer/ask methods:Exception already raised | Alexander_Kabui | |
| 2024-05-24 | Update custom_request to raise LLMError for Exceptions. | Alexander_Kabui | |
| 2024-05-24 | Remove redundant llm base class exception. | Alexander_Kabui | |
| 2024-05-23 | Remove irrelevant variable assignments. | Alexander_Kabui | |
| 2024-05-23 | rename gnqna route to search. | Alexander_Kabui | |
| 2024-05-23 | Refactor error handling code. | Alexander_Kabui | |
| 2024-05-22 | This commit does the following: | Alexander_Kabui | |
| * Adds a new table to store the history records. * Remove the redis dependancy. | |||
| 2024-05-22 | Refactor error handling for llm api's. | Alexander_Kabui | |
| 2024-05-22 | Register LLM error in app. | Alexander_Kabui | |
| * do refactoring for gn3:llm:errors | |||
| 2024-05-21 | Remove obsolete functions. | Alexander_Kabui | |
| 2024-05-21 | Add search gnqa history functionality. | Alexander_Kabui | |
| 2024-05-20 | Delete search endpoints for datasets/publications. | Munyoki Kilyungi | |
| * gn3/api/metadata.py: Delete "query_and_frame" import. (search_datasets): Delete. (search_publications): Ditto. Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-05-20 | Remove unused variable. | Munyoki Kilyungi | |
| Signed-off-by: Munyoki Kilyungi <me@bonfacemunyoki.com> | |||
| 2024-05-17 | Add endpoint for getting prev user searches | Alexander_Kabui | |
| 2024-05-17 | Refactor custom request codebase. | Alexander_Kabui | |
| 2024-05-17 | Timeout code refactoring. | Alexander_Kabui | |
| 2024-05-16 | Refactor code for http request adapters. | Alexander_Kabui | |
| 2024-05-16 | Pylint Fixes. | Alexander_Kabui | |
| 2024-05-16 | Init code refactoring for clients fahamu interface | Alexander_Kabui | |
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index : genenetwork3 | |
| GeneNetwork3 REST API for data science and machine learning |
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