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genenetwork3
auth/implement-authorization-code-flow
bugfix/remove-pre-data-parsing
chores/ctl-wgcna-enhancement
chores/fixes
ci-cd-scripts
correlation-return-fewer-results
data-access-levels-endpoint
feature/autocomplete-generation
feature/lmdb-rust
feature/reimplement-corrmp
fixture-for-pcorrs
gn-guile
luna
main
migrate-to-python3.10
oauth2_auth_flow
refactor-circular-import
rework-genotype-linking
technical-specification
GeneNetwork3 REST API for data science and machine learning
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2024-09-05
Use the correct header to request json-ld data.
Munyoki Kilyungi
2024-09-05
Add comment history.
Munyoki Kilyungi
2024-09-05
Always output the top-level graph when compacting.
Munyoki Kilyungi
2024-09-05
Use correct prefix when querying for email in triple.
Munyoki Kilyungi
2024-09-05
Create global wiki context usable by all functions in gn3.rdf.wiki
Munyoki Kilyungi
2024-09-05
Ignore type error and add a FIXME stub.
Munyoki Kilyungi
2024-09-05
Add missing doc-strings to make pylint pass.
Munyoki Kilyungi
2024-09-05
Restructure RDF module.
Munyoki Kilyungi
2024-08-29
chore: pylint docstring
John Nduli
2024-08-29
docs: add function comments
John Nduli
2024-08-29
feat: add api calls to get categories and last comment
John Nduli
2024-08-29
Fix minor typo.
Munyoki Kilyungi
2024-08-29
Remove "@id" re-map in the json-ld base context.
Munyoki Kilyungi
2024-08-29
Fetch the latest comment by the versionId.
Munyoki Kilyungi
2024-08-29
Make fetching wiki entries by symbol case insensitive.
Munyoki Kilyungi
2024-08-29
Add "created" to wiki return.
Munyoki Kilyungi
2024-08-29
Update doc-string for "handle_sparql_errors".
Munyoki Kilyungi
2024-08-29
Return the correct status error code for url errors.
Munyoki Kilyungi
2024-08-26
Fix mypy errors.
Munyoki Kilyungi
2024-08-26
Move "GET /wiki/<symbol>" end-point to gn3.api.metadata.wiki.
Munyoki Kilyungi
2024-08-26
Auto-pep8 buffer and ignore type check for payload.
Munyoki Kilyungi
2024-08-26
Fix pylint errors.
Munyoki Kilyungi
2024-08-26
Fix handling of sparql errors.
Munyoki Kilyungi
2024-08-26
If there's no data, return a 404.
Munyoki Kilyungi
2024-08-26
Set correct content-header & status code for ld+json/json response.
Munyoki Kilyungi
2024-08-26
Replace map with list comprehension.
Munyoki Kilyungi
2024-08-26
Fetch all the wiki entries by symbol.
Munyoki Kilyungi
2024-08-26
Move constants to their own file.
Munyoki Kilyungi
2024-08-26
Run autopep8 against file.
Munyoki Kilyungi
2024-08-26
chore: fix pylint errors
John Nduli
2024-08-26
refactor: split out utlities into their modules and change api to use metadata
John Nduli
2024-08-26
refactor: clean up wiki edit implementation
John Nduli
2024-08-26
feat: add support for categories in edit query and clearer errors
John Nduli
2024-08-26
feat: support for edit wiki entry
John Nduli
2024-08-13
Fix pylint errors.
Munyoki Kilyungi
2024-08-09
Use correct stemming strategy when searching.
Munyoki Kilyungi
2024-08-09
Add RIF/WIKI as search prefixes for XRF/XWK.
Munyoki Kilyungi
2024-08-01
Add logging for helping with troubleshooting.
Frederick Muriuki Muriithi
2024-08-01
Add handler for unhandled exceptions from `gn3.oauth2` module.
Frederick Muriuki Muriithi
2024-08-01
Update case-attribute editing to use new authorisation.
Frederick Muriuki Muriithi
2024-08-01
Add `gn3.oauth2` module to handle authorisations
Frederick Muriuki Muriithi
2024-08-01
Stem group field regardless of case.
Arun Isaac
2024-08-01
Stem all the time.
Arun Isaac
2024-07-08
Pass output directory to R/qtl script instead of pulling it from the
zsloan
2024-07-05
fix: return query error message from xapian
John Nduli
2024-07-03
fix: use correct prefix and index key; group wiki cache query
John Nduli
2024-07-03
feat: add wikidata prefix to search api
John Nduli
2024-06-26
Increase max number of results to 50000 for Xapian search
zsloan
2024-06-14
fix: typehints in index-genenetwork script
John Nduli
2024-06-12
refactor: add db_utils global logger that will be the default
John Nduli
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